Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I10
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    25   0.84 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   4.5  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   4.5  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    22   4.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.8  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 338 SPKIMMKKNTKVDIXQRIVWMDLEMTGLDIENDHI 442
           S K+M+ + T  DI  R + M LE   ++ EN+ +
Sbjct: 19  SSKVMLTRGTVNDIVSRNITMVLENLLMNYENNQL 53


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 412 HFKIHPYNPLXYVNFSIFFHHYFRR 338
           H  +H Y PL      + F H+ +R
Sbjct: 133 HLAMHDYPPLVSGALHLLFRHFSQR 157


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 189 CTTLHYIHTISEIY 148
           C TLH+ H   EIY
Sbjct: 467 CNTLHHWHHCPEIY 480


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 412 HFKIHPYNPLXYVNFSIFFHHYFRR 338
           H  +H Y PL      + F H+ +R
Sbjct: 101 HLAMHDYPPLVSGALHLLFRHFSQR 125


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
          receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 42 SNLDMCVKELXDRS 1
          SNLDM V E  DRS
Sbjct: 44 SNLDMSVLECADRS 57


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 42  SNLDMCVKELXDRS 1
           SNLDM V E  DRS
Sbjct: 134 SNLDMSVLECADRS 147


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 391 NPLXYVNFSIFFHHYFRR 338
           NPL Y  F++ +   FRR
Sbjct: 377 NPLIYTIFNLDYRRAFRR 394


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 391 NPLXYVNFSIFFHHYFRR 338
           NPL Y  F++ +   FRR
Sbjct: 377 NPLIYTIFNLDYRRAFRR 394


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 391 NPLXYVNFSIFFHHYFRR 338
           NPL Y  F++ +   FRR
Sbjct: 377 NPLIYTIFNLDYRRAFRR 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,871
Number of Sequences: 438
Number of extensions: 3702
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)