Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_I09
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0389 + 3067808-3069121                                           29   4.3  
07_01_0220 - 1631395-1631496,1632063-1634036                           27   9.9  
04_01_0622 - 8175226-8175312,8175674-8175763,8176370-8176457,817...    27   9.9  
03_06_0497 - 34332310-34334415                                         27   9.9  
01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008     27   9.9  
01_03_0146 + 13120727-13121037,13121063-13121912,13122854-131235...    27   9.9  

>12_01_0389 + 3067808-3069121
          Length = 437

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 113 VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTEL 223
           VTS T + Y ++  +RW+ +  S+ P    PL L++L
Sbjct: 22  VTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLSDL 58


>07_01_0220 - 1631395-1631496,1632063-1634036
          Length = 691

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 103 ETVSY*RNFTSLL*ENKKSLDCFHLVYNPS*TAS 204
           E  S  RNF  L    KK  D + + YNPS T S
Sbjct: 627 ELASTHRNFNELASMRKKGFDPYIMSYNPSSTGS 660


>04_01_0622 -
           8175226-8175312,8175674-8175763,8176370-8176457,
           8177021-8177095,8177754-8177821,8177898-8177955,
           8178862-8178942,8179968-8180038,8180144-8180225,
           8182327-8182449,8183023-8183129,8183201-8183263,
           8183877-8183936,8184100-8184151,8185566-8185598,
           8185820-8185871,8185965-8186028,8186693-8186749,
           8186962-8187006,8187083-8187190,8188147-8188212,
           8188382-8188492,8190841-8191035,8191419-8191499,
           8191591-8191630,8191764-8191816
          Length = 669

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 291 DTSLIYPHQYPVSLSL-HH--KSTWSCXKEKVTFXNGIHVDISCCSSAFNVCFD 443
           D S I+    P+S+ L  H  +S W   +E +    G H+D+   SSA N   D
Sbjct: 491 DISYIFSGYAPLSIRLVQHAVRSGWRSIEELLKLLPGPHLDLKRGSSAINSSLD 544


>03_06_0497 - 34332310-34334415
          Length = 701

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 409 PAVAVLSMFVLMVIILILRFGAQWCKL-RHTTYADQXEWNEXEXYEQKVSY 558
           P + +L++ +L V+IL+L   A    + R   YA++ E  E E    ++SY
Sbjct: 305 PPLIILTILLLSVVILLLAAAAVAALVVRSRRYAEEEEEWEIEYGPHRISY 355


>01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008
          Length = 749

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 149 IRNRWIVSIWSTTPHKQPPLDL 214
           IR  WI+ +W++   ++PP+++
Sbjct: 95  IRKMWIILLWASPTRRRPPVNM 116


>01_03_0146 +
           13120727-13121037,13121063-13121912,13122854-13123561,
           13123596-13123943
          Length = 738

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 149 IRNRWIVSIWSTTPHKQPPLDL 214
           IR  WI+ +W++   ++PP+++
Sbjct: 95  IRKMWIILLWASPTRRRPPVNM 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,636,351
Number of Sequences: 37544
Number of extensions: 249246
Number of successful extensions: 567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)