Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_I01
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20500.1 68418.m02436 glutaredoxin, putative similar to gluta... 111 5e-25
At1g77370.1 68414.m09010 glutaredoxin, putative similar to gluta... 105 2e-23
At5g40370.1 68418.m04897 glutaredoxin, putative similar to gluta... 95 4e-20
At5g63030.1 68418.m07907 glutaredoxin, putative similar to gluta... 85 3e-17
At2g20270.1 68415.m02368 glutaredoxin family protein contains gl... 78 6e-15
At4g28730.1 68417.m04109 glutaredoxin family protein contains gl... 72 3e-13
At4g15700.1 68417.m02390 glutaredoxin family protein contains IN... 59 2e-09
At4g15680.1 68417.m02388 glutaredoxin family protein contains IN... 59 2e-09
At4g15690.1 68417.m02389 glutaredoxin family protein contains IN... 59 3e-09
At4g15660.1 68417.m02386 glutaredoxin family protein contains IN... 57 9e-09
At4g15670.1 68417.m02387 glutaredoxin family protein contains IN... 56 2e-08
At5g18600.1 68418.m02201 glutaredoxin family protein contains gl... 52 4e-07
At4g33040.1 68417.m04701 glutaredoxin family protein contains IN... 49 2e-06
At2g38270.1 68415.m04700 CAX-interacting protein, putative ident... 46 2e-05
At3g62930.1 68416.m07069 glutaredoxin family protein contains gl... 45 5e-05
At3g02000.1 68416.m00160 glutaredoxin family protein contains IN... 45 5e-05
At2g30540.1 68415.m03719 glutaredoxin family protein contains IN... 45 5e-05
At5g11930.1 68418.m01395 glutaredoxin family protein contains IN... 44 7e-05
At1g03020.1 68414.m00274 glutaredoxin family protein contains IN... 44 1e-04
At4g08550.1 68417.m01406 glutaredoxin-related contains Pfam prof... 42 5e-04
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.006
At5g14070.1 68418.m01646 glutaredoxin family protein contains IN... 38 0.008
At5g06470.1 68418.m00725 glutaredoxin family protein similar to ... 38 0.008
At3g28850.1 68416.m03599 glutaredoxin family protein 37 0.010
At3g15660.1 68416.m01985 glutaredoxin family protein contains Pf... 37 0.013
At5g13810.1 68418.m01613 glutaredoxin family protein 35 0.054
At5g58530.1 68418.m07329 glutaredoxin family protein 34 0.072
At5g39865.1 68418.m04835 glutaredoxin family protein 34 0.072
At5g42150.1 68418.m05131 expressed protein 32 0.29
At5g01420.1 68418.m00055 glutaredoxin family protein 32 0.29
At1g64500.1 68414.m07312 glutaredoxin family protein 32 0.29
At2g41330.1 68415.m05102 glutaredoxin family protein contains Pf... 32 0.38
At4g10630.1 68417.m01737 glutaredoxin family protein contains Pf... 31 0.51
At3g57070.1 68416.m06354 glutaredoxin family protein contains Pf... 31 0.67
At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO ... 31 0.88
At5g03870.1 68418.m00360 glutaredoxin family protein contains Pf... 30 1.5
At1g32760.1 68414.m04039 glutaredoxin family protein contains Pf... 29 2.0
At2g31210.1 68415.m03811 basic helix-loop-helix (bHLH) family pr... 29 3.6
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At3g02760.1 68416.m00268 histidyl-tRNA synthetase, putative / hi... 28 4.7
At5g08415.1 68418.m00991 lipoic acid synthase family protein sim... 28 6.2
At3g49900.1 68416.m05455 BTB/POZ domain-containing protein conta... 28 6.2
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 27 8.2
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 27 8.2
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 27 8.2
At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,... 27 8.2
At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,... 27 8.2
>At5g20500.1 68418.m02436 glutaredoxin, putative similar to
glutaredoxin [Populus tremula x Populus tremuloides]
gi|19548658|gb|AAL90750
Length = 135
Score = 111 bits (266), Expect = 5e-25
Identities = 53/100 (53%), Positives = 68/100 (68%)
Frame = +1
Query: 130 AGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD 309
A S F+K+ IS K+V+FSKSYCPYCK AK VF ++ Q V+EL+ER+DG +IQ
Sbjct: 26 AASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQT 85
Query: 310 NLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
L ++ G RTVPQVFING +GG D YESG+L +L
Sbjct: 86 ALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125
>At1g77370.1 68414.m09010 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699
Length = 130
Score = 105 bits (253), Expect = 2e-23
Identities = 48/104 (46%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 SKMAGSIX-IQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGN 297
S AG+ + F++ AI +K+V+FSKSYCPYC +K +F ++K+ V+EL++R+DG+
Sbjct: 24 SNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGD 83
Query: 298 TIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
IQ L + G RTVPQVF+NG +GG D+ A ESG+L+ +L
Sbjct: 84 QIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 127
>At5g40370.1 68418.m04897 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] SWISS-PROT:P55143
Length = 111
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/93 (46%), Positives = 60/93 (64%)
Frame = +1
Query: 151 QFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTG 330
Q KE ++ + VVVFSK+YCPYC K++ +++ K +EL+ DG+ IQ LA+ TG
Sbjct: 4 QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTG 63
Query: 331 FRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
RTVP VFI GN +GG L++ GKL P+L
Sbjct: 64 QRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLL 96
>At5g63030.1 68418.m07907 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] gi|1732424|emb|CAA89699
Length = 125
Score = 85.4 bits (202), Expect = 3e-17
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +1
Query: 115 RSSKMAGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDG 294
R SK + + + KE +S VVVFSK+YC YC+ K + ++ KV+EL+E DG
Sbjct: 9 RMSKEEMEVVVNK-AKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDG 67
Query: 295 NTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
IQ L++ TG TVP VFI GN +GG V + GKL P+L
Sbjct: 68 GEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLL 112
>At2g20270.1 68415.m02368 glutaredoxin family protein contains
glutaredoxin domain, Pfam:PF00462
Length = 179
Score = 77.8 bits (183), Expect = 6e-15
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +1
Query: 97 SSGKITRSSKMAGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIEL 276
SS K SS + +++ +K ++++ VVV+SK++C Y K +F+ ++ V+EL
Sbjct: 58 SSVKAMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVEL 117
Query: 277 NER-DDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
++ +G+ +Q+ L ++TG TVP VFI G +GG SD L+ G+LE +L
Sbjct: 118 DQLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169
>At4g28730.1 68417.m04109 glutaredoxin family protein contains
glutaredoxin domain, Pfam:PF00462
Length = 174
Score = 72.1 bits (169), Expect = 3e-13
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 97 SSGKITRSSKMAGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIEL 276
SS + SS GS +++ I++ ++++ VV++SK++C YC K +F+++ V+EL
Sbjct: 54 SSSAASSSSSSFGS-RMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVEL 112
Query: 277 NE-RDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
++ G +Q L +LTG TVP VF+ G +GG +D L G LE ML
Sbjct: 113 DQLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELML 164
>At4g15700.1 68417.m02390 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
+++ IS+ VV+FSK+ C K +F + + EL+E G I+ LAQL
Sbjct: 4 LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI G VGG + V +L+ + L PML
Sbjct: 64 TVPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>At4g15680.1 68417.m02388 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
+++ IS+ VV+FSK+ C K +F + EL+E + G I+ LAQL
Sbjct: 4 LQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI G VGG + V +L+ + L PML
Sbjct: 64 TVPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>At4g15690.1 68417.m02389 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
+++ IS+ VV+FSK+ C K +F + EL+E + G I+ LAQL
Sbjct: 4 LQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI G VGG + V +L+ + L PML
Sbjct: 64 TVPVVFIGGQLVGGANQVMSLHLNRSLVPML 94
>At4g15660.1 68417.m02386 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 57.2 bits (132), Expect = 9e-09
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
I++ IS+ VV+FS + C K +F + + EL+E + G I+ LAQL
Sbjct: 4 IQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI G VGG + V +L+ + L PML
Sbjct: 64 TVPVVFIGGQLVGGANQVMSLHLNRSLIPML 94
>At4g15670.1 68417.m02387 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
+++ S+ +V+FSK+ C K +F + + EL+E + G I+ LAQL
Sbjct: 4 LQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI G VGG + V +L+ + L PML
Sbjct: 64 TVPVVFIGGQLVGGANQVMSLHLNRSLIPML 94
>At5g18600.1 68418.m02201 glutaredoxin family protein contains
glutaredoxin domain, INTERPRO:IPR002109
Length = 102
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/91 (35%), Positives = 46/91 (50%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
I + + + VV++SKS C K + V EL+E G I+ L +L
Sbjct: 4 ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
VP VFI G VGG ++V +L+ +G L PML
Sbjct: 64 AVPGVFIGGELVGGANEVMSLHLNGSLIPML 94
>At4g33040.1 68417.m04701 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 144
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGN---TIQDNLAQ-L 324
I+ IS+ V++FS+S C C + K + + VIEL++ + + +QD + +
Sbjct: 42 IRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGV 101
Query: 325 TGFRTVPQVFINGNCVGGGSDVKALYESGKLEPMLI 432
+ P VFI CVGG + AL+ SG+L P L+
Sbjct: 102 SVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLV 137
>At2g38270.1 68415.m04700 CAX-interacting protein, putative
identical to cDNA CAXIP1-like protein GI:27752306;
contains Pfam profile PF00462: Glutaredoxin; contains
TIGRfam profile TIGR00365: glutaredoxin-related protein
Length = 293
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/113 (20%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 106 KITRSSKMAGSIXIQQFIKEAISKDKVVVFSKS-----YCPYCKLAKDVFEKVKQPIKVI 270
++T + ++ +++ I + + KVV F K C + + + E + +
Sbjct: 180 RLTPGRHVELTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRVVGILESQGVDYETV 239
Query: 271 ELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
++ + + + +++ L + + T PQ+F+ G VGG + ++YE+G+L +L
Sbjct: 240 DVLDDEYNHGLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYENGELANIL 292
>At3g62930.1 68416.m07069 glutaredoxin family protein contains
glutaredoxin domain, INTERPRO:IPR002109
Length = 102
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
++ + VV+FSKS C + + + V EL++ +G I+ L Q+
Sbjct: 4 VRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMGCKP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
+VP VFI +GG + V L +L ML
Sbjct: 64 SVPAVFIGQQFIGGANQVMTLQVKNQLAAML 94
>At3g02000.1 68416.m00160 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
I+ S+ VV+FS S C C K +F + V EL+ G IQ L +L G
Sbjct: 32 IESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGCS 91
Query: 337 ------TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
++P VFI G VG V A + +G L P+L
Sbjct: 92 GSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLL 128
>At2g30540.1 68415.m03719 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +1
Query: 172 SKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQV 351
S+ VV+FSKS C + +F+ + V E+++ + I+ L +L VP +
Sbjct: 9 SEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLGCSTPVPAI 68
Query: 352 FINGNCVGGGSDVKALYESGKLEPML 429
F+ G +G ++V +L+ SG L P++
Sbjct: 69 FVGGKLIGSTNEVMSLHLSGSLVPLV 94
>At5g11930.1 68418.m01395 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 148
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 157 IKEAISKDKVVVFSK-SYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGF 333
I IS+ V++F++ S C C + K + V VIE+ DDG +A L
Sbjct: 58 IGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEI---DDGE-----IAYLA-V 108
Query: 334 RTVPQVFINGNCVGGGSDVKALYESGKLEPMLI 432
P +FI G CVGG + AL+ SG+L P L+
Sbjct: 109 EAAPVLFIGGTCVGGFESLVALHLSGQLIPRLV 141
>At1g03020.1 68414.m00274 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 102
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/91 (30%), Positives = 41/91 (45%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
I + VV+FSK+ C K + V EL+E +G I+ L +L
Sbjct: 4 ISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELGCKP 63
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
TVP VFI VGG + + +L +L +L
Sbjct: 64 TVPAVFIGQELVGGANQLMSLQVRNQLASLL 94
>At4g08550.1 68417.m01406 glutaredoxin-related contains Pfam profile
PF04784: Protein of unknown function, DUF547, weak hit
to PF00462: Glutaredoxin
Length = 587
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/84 (29%), Positives = 48/84 (57%)
Frame = +1
Query: 169 ISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQ 348
+ K +++++++ C C+ + +F K+ ++ +E+N D T + L +++G VP
Sbjct: 221 VMKGRIILYTRLGCEECRGCR-LFLHEKR-LRYVEINI-DIYPTRKVELEKISGGDVVPM 277
Query: 349 VFINGNCVGGGSDVKALYESGKLE 420
VF N VG ++K L ESG+LE
Sbjct: 278 VFFNEKLVGSYKELKVLEESGELE 301
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/104 (21%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 115 RSSKMAGSIXIQQFIKEAISKDKVVVFSKSYC--PYCKLAKDVFEKVKQPIKVIELNERD 288
R+ ++ + ++ +++ + V++F K P C ++ V + +K+ +
Sbjct: 143 RAQPVSTADALKSRLEKLTNSHPVMLFMKGIPEEPRCGFSRKVVDILKEVNVDFGSFDIL 202
Query: 289 DGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLE 420
N +++ L + + + T PQ++ NG +GG A++ESG+L+
Sbjct: 203 SDNEVREGLKKFSNWPTFPQLYCNGELLGGADIAIAMHESGELK 246
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +1
Query: 106 KITRSSKMAGSIXIQQFIKEAISKDKVVVFSKSYC--PYCKLAKDVFEKVK-QPIKVIEL 276
K+ + G ++ +K I+ +V++F K P C + V + ++ + +
Sbjct: 377 KVLTEKGITGEQSLEDRLKALINSSEVMLFMKGSPDEPKCGFSSKVVKALRGENVSFGSF 436
Query: 277 NERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
+ D ++ + + + T PQ++ G +GG + L ESG L+ L
Sbjct: 437 DILTD-EEVRQGIKNFSNWPTFPQLYYKGELIGGCDIIMELSESGDLKATL 486
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 211 PYCKLAKDVFEKVKQPIKVIELNERDD--GNTIQDNLAQLTGFRTVPQVFINGNCVGGGS 384
P C + V E + Q + IE D + ++ L + + + PQ+++ G +GG
Sbjct: 307 PKCGFSGKVVEILNQ--EKIEFGSFDILLDDEVRQGLKVYSNWSSYPQLYVKGELMGGSD 364
Query: 385 DVKALYESGKLEPML 429
V + +SG+L+ +L
Sbjct: 365 IVLEMQKSGELKKVL 379
>At5g14070.1 68418.m01646 glutaredoxin family protein contains
INTERPRO Domain IPR002109, Glutaredoxin
(thioltransferase)
Length = 140
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = +1
Query: 157 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 336
I+ +++ VV+FS S C C K +F + V EL+ G I L +L G
Sbjct: 34 IESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCS 93
Query: 337 T--------VPQVFINGNCVGGGSDVKALYESGKLEPML 429
+ +P VFI G VG V A + +G L P+L
Sbjct: 94 SGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLL 132
>At5g06470.1 68418.m00725 glutaredoxin family protein similar to
Glutaredoxin 3 (Grx3) (SP:P37687) {Escherichia coli
O157:H7}; contains Pfam profile PF00462: Glutaredoxin
Length = 239
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 322 LTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 435
L G T P++FI G +GG +V AL E+GKL+ +L G
Sbjct: 141 LGGKVTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQG 178
>At3g28850.1 68416.m03599 glutaredoxin family protein
Length = 428
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Frame = +1
Query: 160 KEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKV--IELNERDDG--NTIQDNLAQLT 327
++++ K++V+++ S K ++ + V+ +K I ++ERD + +D L +L
Sbjct: 245 EQSVGKERVILYFTSLRGIRKTYEESCD-VRVILKSLGIRVDERDVSMHSGFKDELKELL 303
Query: 328 GFR-------TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 435
G + T+P+VF+ +GG +++ L E GKLE +L G
Sbjct: 304 GEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGG 346
>At3g15660.1 68416.m01985 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 169
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +1
Query: 145 IQQFIKEAISKDKVVVFSKSY-----CPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD 309
++ ++ + + V+++ K C + LA V ++ PI + E + +++
Sbjct: 65 LKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQE---LKN 121
Query: 310 NLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 429
+ + + T PQ+FI G +GG + +++ G+LE L
Sbjct: 122 AVKSFSHWPTFPQIFIKGEFIGGSDIILNMHKEGELEQKL 161
>At5g13810.1 68418.m01613 glutaredoxin family protein
Length = 274
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 337 TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
++PQVFI G VGG +K+L+E G+L +L
Sbjct: 185 SLPQVFIMGKYVGGADVIKSLFEIGELAKIL 215
>At5g58530.1 68418.m07329 glutaredoxin family protein
Length = 273
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 340 VPQVFINGNCVGGGSDVKALYESGKLEPML 429
+P+VFI G +GG +VK L+E G+L+ ++
Sbjct: 181 LPRVFIGGRYIGGAEEVKQLHEIGELKKLV 210
>At5g39865.1 68418.m04835 glutaredoxin family protein
Length = 390
Score = 34.3 bits (75), Expect = 0.072
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Frame = +1
Query: 145 IQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFE-KVKQPIKVIELNERDDG--NTIQDNL 315
+ +F ++ + K++VV++ S K +D ++ I ++ERD + +D L
Sbjct: 214 VSRFKRKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDEL 273
Query: 316 AQLTGFR-------TVPQVFINGNCVGGGSDVKALYESGKLEPML 429
+L + T+P+VF+ +GG ++K L E+G+LE ++
Sbjct: 274 KKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLI 318
>At5g42150.1 68418.m05131 expressed protein
Length = 315
Score = 32.3 bits (70), Expect = 0.29
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 10 SSIPNDDVIATKNKNLIHIFISKFSTWVLSSGKITRSSKMAGSIXIQQFIKEAISK---D 180
++I + + I+ + L I F+ V +G + S+ S+ + KE K
Sbjct: 29 TTISSSEPISRRFGGLPEIKTPSFAGGV--AGVVFFSAAAVSSLGQEVHAKEMAQKFNPK 86
Query: 181 KVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELN 279
+VV++ CP+C K + K P KV+E+N
Sbjct: 87 EVVLYQYEACPFCNKVKAFLDYNKIPYKVVEVN 119
>At5g01420.1 68418.m00055 glutaredoxin family protein
Length = 401
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 343 PQVFINGNCVGGGSDVKALYESGKLEPMLIG 435
P +F+ G C+GG V L+E GK + + G
Sbjct: 317 PVLFVKGRCIGGAQRVLGLHEQGKFKILFEG 347
>At1g64500.1 68414.m07312 glutaredoxin family protein
Length = 368
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 343 PQVFINGNCVGGGSDVKALYESGKLEPML 429
P+VF+ G +GG ++V A+ E+GKL +L
Sbjct: 273 PRVFVKGRYLGGAAEVTAMNENGKLGRVL 301
>At2g41330.1 68415.m05102 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 402
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 340 VPQVFINGNCVGGGSDVKALYESGKLEPML 429
+PQVFI G +GG ++K L + G+L ML
Sbjct: 314 LPQVFIRGVRIGGIEEIKILNDGGELAEML 343
>At4g10630.1 68417.m01737 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 334
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 343 PQVFINGNCVGGGSDVKALYESGKLEPMLIG 435
P+VF+ G +GGG +V L E G ++ G
Sbjct: 242 PRVFVKGRYIGGGEEVLRLVEEGSFGELISG 272
>At3g57070.1 68416.m06354 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 417
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 340 VPQVFINGNCVGGGSDVKALYESGKLEPML 429
+PQVFI G +GG ++ L + G+L ML
Sbjct: 329 LPQVFIRGTHIGGVEEIMQLNDGGELAEML 358
>At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO
Domain IPR002109, Glutaredoxin (thioltransferase)
Length = 630
Score = 30.7 bits (66), Expect = 0.88
Identities = 25/99 (25%), Positives = 47/99 (47%)
Frame = +1
Query: 124 KMAGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTI 303
K++G + + E K ++ FS+S C + +F + ++ E+N D ++
Sbjct: 139 KISGVKVLVKMKNEEEIKGRITFFSRSNCRDSTAVR-LFLR-ERGFDFSEINI-DVYSSR 195
Query: 304 QDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLE 420
+ L + TG VPQ+F N GG + +L SG+ +
Sbjct: 196 EKELVERTGSSQVPQIFFNEKHFGGLMALNSLRNSGEFD 234
>At5g03870.1 68418.m00360 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 384
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 340 VPQVFINGNCVGGGSDVKALYESGKLEPMLIG 435
+P VF+ G VG +V L E GKL +L G
Sbjct: 296 IPAVFVKGRMVGSVEEVMRLEEEGKLGILLEG 327
>At1g32760.1 68414.m04039 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 314
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 343 PQVFINGNCVGGGSDVKALYESGKLEPML 429
P+VF+ G +GG +V L E G L +L
Sbjct: 224 PRVFVKGKYIGGAEEVMRLVEEGLLGELL 252
>At2g31210.1 68415.m03811 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain; PMID: 12679534
Length = 428
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 90 GSQLWKNYAFI*NGRIYXHSTVYQGSYLQR 179
G Q+ ++Y+F+ N +IY ST+Y + R
Sbjct: 381 GGQIGEHYSFLFNTKIYEGSTIYASAIANR 410
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 34 IATKNKNLIHIFISKFSTWVLSSGKITRSSKMAGSIXIQQFIKEAISKDKVVVFS-KSYC 210
I +KNK ++ + K TW+L RS ++ +I +++ + + +F SY
Sbjct: 820 IISKNKEGVYSILGKILTWLLGHVPSWRSLRIV-TILFDNYVERISRRTALGIFMLSSYI 878
Query: 211 PYCKLA 228
P KL+
Sbjct: 879 PLNKLS 884
>At3g02760.1 68416.m00268 histidyl-tRNA synthetase, putative /
histidine--tRNA ligase, putative similar to SP|P12081
Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA
ligase) (HisRS) {Homo sapiens}; contains Pfam profiles
PF00587: tRNA synthetase class II core domain (G, H, P,
S and T), PF03129: Anticodon binding domain
Length = 479
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 532 GCLCSYIYVLTNPFKKNVLLNSLLSRRQY 618
G LCS Y LT PF + V +N + S ++Y
Sbjct: 108 GELCSLRYDLTVPFARYVAMNGITSFKRY 136
>At5g08415.1 68418.m00991 lipoic acid synthase family protein
similar to lipoic acid synthase from Arabidopsis
thaliana [gi:3928758], from Mus musculus [gi:14669826]
Pfam profile PF04055: radical SAM domain protein
Length = 394
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 94 LSSGKITRSSKMAGSIXIQQFIKEAISK 177
++SG + RSS AG + ++ +KE+ SK
Sbjct: 364 VASGPLVRSSYRAGELFVKTMVKESYSK 391
>At3g49900.1 68416.m05455 BTB/POZ domain-containing protein contains
BTB/POZ domain, INTERPRO:IPR000210
Length = 517
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 205 YCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFIN 360
Y + +L ++ ++V+ + E DDG ++D+L LT VF+N
Sbjct: 122 YGAHIELTPSNVVSLRIAVEVLLITEADDGGRVRDSLRNLTESYLRRVVFVN 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 SKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIE--LNERDDGNTIQDNLAQLTGFRTV 342
SKD ++ +C +C+ + ++ K+ + ++ I+ + + DG T + A+ GF T+
Sbjct: 459 SKDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTI 517
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 SKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIE--LNERDDGNTIQDNLAQLTGFRTV 342
SKD ++ +C +C+ + ++ K+ + ++ I+ + + DG T + A+ GF T+
Sbjct: 459 SKDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTI 517
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 118 SSKMAGSIXIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVF 240
S+ GS IQQ ++ ++K VF + CKL DVF
Sbjct: 541 SADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVF 581
>At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 408 WKIRTYVNRINFKLIVLLLFAYLNXYFG 491
W IRTY+N + + L AY + Y G
Sbjct: 327 WSIRTYINDFRKRKLNLAPIAYFSTYHG 354
>At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 408 WKIRTYVNRINFKLIVLLLFAYLNXYFG 491
W IRTY+N + + L AY + Y G
Sbjct: 327 WSIRTYINDFRKRKLNLAPIAYFSTYHG 354
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,367,400
Number of Sequences: 28952
Number of extensions: 260088
Number of successful extensions: 771
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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