Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H24
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          34   0.004
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 33.9 bits (74), Expect = 0.004
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
 Frame = +3

Query: 246  DDHGFXPLHWACKEGHLKIVEMLIKRGARINVTNMGDDTPLHLSAAHGHRPVVQ-LLLQN 422
            +D     LH A       IV+ L+  GA+++  +   +TPLH +       +V+ LLLQ 
Sbjct: 781  NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840

Query: 423  RVDVNFTNEHGNSPXHYACFWGYNAIAEDXVLAGALV 533
             + ++ TN+ G +    A +     I    + AGA V
Sbjct: 841  GLRLDCTNDDGLTALQAAVYARNLKITRILLEAGASV 877



 Score = 33.1 bits (72), Expect = 0.008
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +3

Query: 333  INVTNMGDDTPLHLSAAHGHRPVVQLLLQNRVDVNFTNEHGNSPXHYACFWGYNAIAEDX 512
            +++ N  ++T LHL+ +    P+V+ LL     +++ +  GN+P H A       +    
Sbjct: 777  LDLPNDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLL 836

Query: 513  VLAGAL-VSIANKYGDTPL 566
            +L G L +   N  G T L
Sbjct: 837  LLQGGLRLDCTNDDGLTAL 855


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 276 ACKEGHLKIVEMLIKRGARINVTNMGDD--TPLHLSAAHGHRPVVQLLLQNRVDVNFTNE 449
           A + GHL+    +++    ++V ++  D  TPL ++    +R + ++LLQ     N  + 
Sbjct: 434 AVEHGHLEKARTILE-STDVDVNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGAIENAHSV 492

Query: 450 H 452
           H
Sbjct: 493 H 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,555
Number of Sequences: 2352
Number of extensions: 11086
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)