BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P04_F_H23 (654 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0820 + 23437811-23440230,23440336-23440534 95 4e-20 03_02_0662 - 10250235-10250433,10250692-10253105 92 4e-19 05_03_0648 + 16563147-16565557,16565655-16565850 90 2e-18 04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 45 6e-05 01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 29 3.2 01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 29 4.3 12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 28 5.6 03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 28 5.6 08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 7.5 03_06_0522 - 34494989-34495045,34495171-34495234,34495378-344954... 28 7.5 >12_02_0820 + 23437811-23440230,23440336-23440534 Length = 872 Score = 95.1 bits (226), Expect = 4e-20 Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 2/178 (1%) Frame = +2 Query: 125 TLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGL 304 +L + Q+L SPD + A L N F+ LS+ L + +R AGL Sbjct: 2 SLDITQVLLSAQSPDGATRKLAEESLKQFQEQNLPGFLFSLSNELANEEKPEESRRLAGL 61 Query: 305 QLKNHLTSKDPTLKQQYQQRWLALAXDVRLYIKENILPAIGT-XNSRPSSAAQCVAYVAV 481 LKN L +K+ K + QRWLAL V+ IK +L + + S S+++Q +A VA Sbjct: 62 ILKNALDAKEQHRKNELFQRWLALDVGVKAQIKGFLLQTLSSPVASARSTSSQVIAKVAG 121 Query: 482 AELPVXQWNDLIPILVENVVHVQSTELKKEATLEAIGYICXDIDAEVL-PERSNQILT 652 E+P QW +LI L+ N+ VQ K+ATLE +GY+C ++ E + ++ N+ILT Sbjct: 122 IEIPQKQWPELIASLLSNIHQVQPN--VKQATLETLGYLCEEVSPEAVDQDQVNKILT 177 >03_02_0662 - 10250235-10250433,10250692-10253105 Length = 870 Score = 91.9 bits (218), Expect = 4e-19 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 3/178 (1%) Frame = +2 Query: 128 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 307 + + Q+L S D A L NF F++ LS L N +R AG+ Sbjct: 1 MDITQVLLAAQSHDGQLRTVAEENLKQFQQQNFPHFLQTLSVELSNDENPPESRRLAGIL 60 Query: 308 LKNHLTSKDPTLKQQYQQRWLALAXDVRLYIKENILPAIGT--XNSRPSSAAQCVAYVAV 481 LKN L +K+ T K+++ QRW+ + ++ +KE++L +G+ +R SS +Q +A VA Sbjct: 61 LKNSLDAKESTRKEEFVQRWMNVDPAIKSQVKESLLITLGSPVFEARRSS-SQVIAKVAA 119 Query: 482 AELPVXQWNDLIPILVENVVHVQSTELKKEATLEAIGYICXDIDAEVL-PERSNQILT 652 E+P W +LI L+ N+ + K+ATL+ +GY+C +I E L ++ N +LT Sbjct: 120 IEIPHQGWPELIVNLLTNMTKPDAPPCLKQATLDCLGYVCEEISPEDLEQDQVNAVLT 177 >05_03_0648 + 16563147-16565557,16565655-16565850 Length = 868 Score = 89.8 bits (213), Expect = 2e-18 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 2/177 (1%) Frame = +2 Query: 128 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 307 + + QIL S D N A L N F+ LS L +R AG+ Sbjct: 1 MNITQILLSAQSADGNLRVVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII 60 Query: 308 LKNHLTSKDPTLKQQYQQRWLALAXDVRLYIKENILPAIGTX-NSRPSSAAQCVAYVAVA 484 LKN L +KD K+ Q+W++L ++ IKE++L +G+ + +++Q +A VA Sbjct: 61 LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI 120 Query: 485 ELPVXQWNDLIPILVENVVHVQSTELKKEATLEAIGYICXDIDAEVL-PERSNQILT 652 E+P +W +LI L+ N+ + K+ATLEA+GY+C +I E L ++ N +LT Sbjct: 121 EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLT 177 >04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278, 35406487-35406564,35406638-35406718,35407300-35407350, 35407788-35407933,35408169-35408235,35408328-35408387, 35408472-35408501,35408776-35408835,35408936-35409052, 35409790-35409903,35410068-35410166,35410572-35410697, 35410774-35410848,35410958-35411029,35411167-35411277, 35411760-35411843,35413149-35413256,35414207-35414308, 35414393-35414455,35414524-35414598,35414901-35414972, 35415063-35415187,35415251-35415302,35415380-35415448, 35415525-35415540,35415941-35415989,35416607-35417180 Length = 1077 Score = 44.8 bits (101), Expect = 6e-05 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 2/162 (1%) Frame = +2 Query: 143 ILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQG-GNSQVARMAAGLQLKNH 319 +L+ +SP+ ++ + ++ +F ++ L L +G G S AR AAGL LKN+ Sbjct: 21 LLDAHISPNSDQARIWQQLQHYSQFPDFNNYLVFL---LARGEGKSFEARQAAGLLLKNN 77 Query: 320 LTSKDPTLKQQYQQRWLALAXDVRLYIKENILPAIGTXNSRPSSAAQCVAYVAVAELPVX 499 L + ++ QQ Y+K +LP IG N S V V + V Sbjct: 78 LRATFSSMPPASQQ-----------YVKSELLPCIGATNKAIRSTVGTVISVLFQIVRVA 126 Query: 500 QWNDLIPILVENVVHVQSTEL-KKEATLEAIGYICXDIDAEV 622 W +L L + + S +L E ++AI IC D+ E+ Sbjct: 127 GWIELFQALHQ---CLDSNDLDHMEGAMDAIYKICEDVPEEL 165 >01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838, 39956998-39957263,39957345-39957420,39957525-39957605, 39957676-39957831,39958565-39958669,39958761-39959367, 39959514-39959585,39959802-39959953,39960063-39960240, 39960642-39960745,39960822-39960953,39961036-39961132, 39961280-39961407,39961533-39961592,39962799-39962918, 39963011-39963091,39963173-39963361,39963826-39964024, 39964177-39964257,39964398-39964588,39965226-39965382, 39965986-39966119,39966266-39966334,39966434-39966481, 39966572-39966646,39967112-39967192,39967399-39967461, 39967564-39967623,39967754-39967795,39968777-39968902, 39969027-39969176 Length = 1843 Score = 29.1 bits (62), Expect = 3.2 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Frame = +2 Query: 284 ARMAAGLQLKNHLTSKDPTLKQQ-----YQQRWLALAXDVRLYIKENILPAIGTXNSRPS 448 A++ G Q + LT+KD +++ + +++ A+ D + K+N L A G+ N PS Sbjct: 1267 AKIVPGNQSADPLTAKDQSVRAKSIEGRHERSEAAMKPDAQQ--KKNALAANGSDNQMPS 1324 Query: 449 SAAQ 460 S+AQ Sbjct: 1325 SSAQ 1328 >01_05_0681 - 24242485-24242560,24242721-24242785,24242874-24243029, 24243073-24243121,24243291-24243366,24243456-24243666, 24244038-24244160,24244245-24244363,24244439-24244532, 24245123-24245233,24245336-24245392 Length = 378 Score = 28.7 bits (61), Expect = 4.3 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +2 Query: 41 RFLFFKKQD*VSLLQHKLKNSETMHAETTLTLIQILEKTVSPDRNELE 184 R+ K++ VS Q+ NS+ + T LTL++ +PD +ELE Sbjct: 164 RYFCLAKREPVSF-QNPSDNSKLLRTPTFLTLVRAGHNRCNPDEDELE 210 >12_02_1200 + 26937624-26937674,26937913-26938005,26938582-26938728, 26940299-26940379,26940711-26940849,26940977-26941013, 26941095-26941202,26941434-26941533,26941638-26941783, 26941862-26941953,26942086-26942180,26942435-26942531, 26942623-26942766,26942912-26943129,26943213-26943323 Length = 552 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +2 Query: 86 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDV 256 H +KN + H + + L T++ + L RYLD T + +K L DV Sbjct: 456 HYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDV 512 >03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107, 8520189-8520284,8520376-8520590,8520675-8520797, 8520887-8520917,8521020-8521079,8521951-8522106, 8522185-8522274,8522347-8522562,8522671-8522805, 8522898-8523401,8523485-8523700,8524411-8524456, 8524542-8524678,8525059-8525191,8526084-8526358 Length = 960 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +2 Query: 341 LKQQYQQRWLALAXDVRLYIKENILPAIGTXNSR--PSSAAQCVAYVAVAELPVXQWNDL 514 L+++ W L + +K+ ++ +I +S ++A V+ +A +P +W +L Sbjct: 60 LRKKITSHWPKLPPHAKASLKQALIDSITIDHSHLVRRASANVVSIIAKYAVPAGEWPEL 119 Query: 515 IPILVE 532 +P + + Sbjct: 120 LPFIFQ 125 >08_02_0114 + 12754155-12754370,12754792-12755340,12755410-12755512, 12755552-12756060 Length = 458 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/47 (23%), Positives = 25/47 (53%) Frame = +2 Query: 236 IKMLSDVLLQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLAL 376 I+ + + ++GG +++A+ A+ + + T+ Q+Y WL L Sbjct: 279 IENVKAITMRGGTNEIAKKASSSDSADKEDQPEKTVPQEYCDTWLLL 325 >03_06_0522 - 34494989-34495045,34495171-34495234,34495378-34495494, 34495878-34496032,34496221-34496319,34496464-34496593, 34496727-34496866,34497050-34497239,34497346-34497547, 34497589-34497631 Length = 398 Score = 27.9 bits (59), Expect = 7.5 Identities = 18/74 (24%), Positives = 36/74 (48%) Frame = +2 Query: 146 LEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQLKNHLT 325 +E+ SP+ + AV+ D + F+K ++ +++ + VAR AA +L + Sbjct: 30 IEEAKSPNTSVAAVAVKNADASVYKIIHGFLKQKNNSIIKVA-ANVARKAASNKLSRKTS 88 Query: 326 SKDPTLKQQYQQRW 367 +L Q+ Q +W Sbjct: 89 DVFDSLIQKQQSKW 102 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,096,001 Number of Sequences: 37544 Number of extensions: 295459 Number of successful extensions: 758 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 738 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 753 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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