Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H22
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0957 - 21238240-21238343,21238467-21238648,21238760-212388...    72   5e-13

>04_03_0957 -
           21238240-21238343,21238467-21238648,21238760-21238836,
           21238928-21239011
          Length = 148

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
 Frame = +1

Query: 256 LHDXNXDKMITNFDKLCADLERQELXTPNGIASPS-TYAQLLXIYLYQNDLCNAKFLWXX 432
           +H     K  ++   LC DL  Q      G A+    YA  L  +LY NDL +A+FLW  
Sbjct: 6   VHAALAGKSYSSVAPLCDDLFLQA--ASRGAATDGWPYAVHLLAHLYLNDLNSARFLWKS 63

Query: 433 IPQNVMSSSPEIVAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRA 579
            PQ    + PE+ A+W IGQ LW +D    Y A   + W+  +++ + A
Sbjct: 64  TPQEAKDARPELAAVWRIGQCLWNRDYAGVYAAAQGFEWSPEIADFVAA 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,162,973
Number of Sequences: 37544
Number of extensions: 231867
Number of successful extensions: 429
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)