Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H22
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.8  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   3.7  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   6.4  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 482 AHIATISGELLITFCGIXFHKNF 414
           A I  +SG L ITFCGI   KN+
Sbjct: 491 AEIFHMSGILAITFCGITM-KNY 512


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 478 ILQLFQGSYSLHFVVXXSIKILHYTDHFDT 389
           ++QL    Y   F    SI   H+ DHFDT
Sbjct: 245 VVQLRDNLYKNSFATLVSIA-RHFPDHFDT 273


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 532 LAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSIKI 645
           LA Y W E ++   R   +N       LIG+S+  I +
Sbjct: 22  LAPYGWDEQMNEAAREFLKNYSDFIPMLIGQSHYKIDL 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,763
Number of Sequences: 2352
Number of extensions: 10354
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)