Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H22
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51205-1|AAB38529.1| 209|Homo sapiens COP9 signalosome subunit ... 117 4e-26
CR456994-1|CAG33275.1| 209|Homo sapiens COPS8 protein. 117 4e-26
BC080617-1|AAH80617.1| 209|Homo sapiens COP9 constitutive photo... 117 4e-26
BC036499-1|AAH36499.1| 209|Homo sapiens COP9 constitutive photo... 117 4e-26
BC003090-1|AAH03090.1| 209|Homo sapiens COP9 constitutive photo... 117 4e-26
AC105760-1|AAY14978.1| 209|Homo sapiens unknown protein. 117 4e-26
>U51205-1|AAB38529.1| 209|Homo sapiens COP9 signalosome subunit 8
CSN8 protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
>CR456994-1|CAG33275.1| 209|Homo sapiens COPS8 protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
>BC080617-1|AAH80617.1| 209|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 8 (Arabidopsis)
protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
>BC036499-1|AAH36499.1| 209|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 8 (Arabidopsis)
protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
>BC003090-1|AAH03090.1| 209|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 8 (Arabidopsis)
protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
>AC105760-1|AAY14978.1| 209|Homo sapiens unknown protein.
Length = 209
Score = 117 bits (281), Expect = 4e-26
Identities = 49/117 (41%), Positives = 74/117 (63%)
Frame = +1
Query: 289 NFDKLCADLERQELXTPNGIASPSTYAQLLXIYLYQNDLCNAKFLWXXIPQNVMSSSPEI 468
+F KL E QEL P GIA+P Y QLL +YL ND+ NA++LW IP + S++ E+
Sbjct: 12 SFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSEL 71
Query: 469 VAIWAIGQKLWKKDLPXTYEALAAYSWTEPVSNIIRALEENVRXRTLNLIGRSYSSI 639
IW++GQ++W++D P Y + A+ W+E V I+ AL + R R L+ ++Y+SI
Sbjct: 72 GGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,206,516
Number of Sequences: 237096
Number of extensions: 1417473
Number of successful extensions: 1932
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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