Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H22
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z82069-1|CAB04902.1|  667|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF016424-5|AAB65326.1|  282|Caenorhabditis elegans Hypothetical ...    29   3.8  

>Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical
           protein C06A12.4 protein.
          Length = 735

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 141 FIMFYFXSGNKKFTIFNNFLLGLLNWC 221
           FI+F F   NK  T+  +F   + NWC
Sbjct: 112 FILFIFYQMNKLITVIRDFSYSVYNWC 138


>Z82069-1|CAB04902.1|  667|Caenorhabditis elegans Hypothetical
           protein W04A8.1 protein.
          Length = 667

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 129 EANNKIRDTIXFNNLTNSKKPRGTKKYKQKFV 34
           EANN +R+T  +N    +KKPR T+K  QK V
Sbjct: 338 EANNDVRNT--WNPELGAKKPRKTRKAPQKTV 367


>AF016424-5|AAB65326.1|  282|Caenorhabditis elegans Hypothetical
           protein F39G3.4 protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = -1

Query: 614 RFRVLXRTFSSKALIMLETGSVQE*AANASYVXGKSF--FHSFCPIAHIATISGELLITF 441
           R  +L  TF   A I+L  G++        Y     F   HS+  +  +   SG+L   F
Sbjct: 127 RVSILIHTFLHIASIVLAVGALFSIILTIKYTGASHFSNIHSYLGVCLLLVYSGQLSFGF 186

Query: 440 CGIXF 426
           C   F
Sbjct: 187 CTYLF 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,161,299
Number of Sequences: 27780
Number of extensions: 233123
Number of successful extensions: 528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)