Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H19
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    27   0.39 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.6  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   3.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.4  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 199 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEXKFIVKAT 360
           EV  R    R+ + DL  Q +K+EN++  L      + +   +LTE K +++ T
Sbjct: 84  EVIPRTPNSREII-DLEAQLEKTENEIVELSENNNALLQNFMELTELKHVLEKT 136


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 166 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ-SVGQIVGEVLKQLTE 336
           Q  +K L E K      +  RDQ   +  ++D++ + LKA +    ++V E +KQ  E
Sbjct: 309 QQIQKYLCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDE 366


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 529 SRHQDPHDSCCKLGDQP 479
           +R+Q P D+ C++G+ P
Sbjct: 305 NRYQTPADAVCEMGEDP 321


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 196 KEVESRLKEGRDQLKDLTKQYDK 264
           KE++ R  E R+Q +DL +Q  K
Sbjct: 643 KELQERCAELREQKRDLQEQLSK 665


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 172 YRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 282
           +  K    K ++  LK    Q+KD     +K ++DLK
Sbjct: 385 FSSKEERDKWIQGELKSLNKQIKDKISHQNKLQDDLK 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,775
Number of Sequences: 2352
Number of extensions: 10742
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)