Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H18
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 95 9e-20
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 95 9e-20
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 95 9e-20
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 30 3.7
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 3.7
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 30 3.7
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 30 3.7
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 30 3.7
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 95.5 bits (227), Expect = 9e-20
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +1
Query: 265 KGRGSCMFTKAEDSLMHFCWKDRTTGEVXDDLLIFPDDCEFTRVNECTTGRVYVXXXXXX 444
K +G + +DSL+HFCWKDRT+G V DDL+IFPDDCEF RV +C +GRVYV
Sbjct: 42 KRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAG 101
Query: 445 XXXXXXWMXEPKAD 486
WM EPK D
Sbjct: 102 SKRLFFWMQEPKTD 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 198 NKHIVXFRAGRMTLKGRMVHPXKRKGLLYVYQ 293
NK++V FRAG+M+LKG V P KRKGL+Y+ Q
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQ 51
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 95.5 bits (227), Expect = 9e-20
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +1
Query: 265 KGRGSCMFTKAEDSLMHFCWKDRTTGEVXDDLLIFPDDCEFTRVNECTTGRVYVXXXXXX 444
K +G + +DSL+HFCWKDRT+G V DDL+IFPDDCEF RV +C +GRVYV
Sbjct: 42 KRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAG 101
Query: 445 XXXXXXWMXEPKAD 486
WM EPK D
Sbjct: 102 SKRLFFWMQEPKTD 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 198 NKHIVXFRAGRMTLKGRMVHPXKRKGLLYVYQ 293
NK++V FRAG+M+LKG V P KRKGL+Y+ Q
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQ 51
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 95.5 bits (227), Expect = 9e-20
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +1
Query: 265 KGRGSCMFTKAEDSLMHFCWKDRTTGEVXDDLLIFPDDCEFTRVNECTTGRVYVXXXXXX 444
K +G + +DSL+HFCWKDRT+G V DDL+IFPDDCEF RV +C +GRVYV
Sbjct: 42 KRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAG 101
Query: 445 XXXXXXWMXEPKAD 486
WM EPK D
Sbjct: 102 SKRLFFWMQEPKTD 115
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 198 NKHIVXFRAGRMTLKGRMVHPXKRKGLLYVYQ 293
NK++V FRAG+M+LKG V P KRKGL+Y+ Q
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQ 51
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 PFNVIRPARNXTMCLFPXELPPRPDVLPNSAVDI 143
P + P+ + T L P EL P P VLP S D+
Sbjct: 401 PAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDL 434
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 PFNVIRPARNXTMCLFPXELPPRPDVLPNSAVDI 143
P + P+ + T L P EL P P VLP S D+
Sbjct: 401 PAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDL 434
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 PFNVIRPARNXTMCLFPXELPPRPDVLPNSAVDI 143
P + P+ + T L P EL P P VLP S D+
Sbjct: 401 PAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDL 434
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 PFNVIRPARNXTMCLFPXELPPRPDVLPNSAVDI 143
P + P+ + T L P EL P P VLP S D+
Sbjct: 401 PAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDL 434
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 30.3 bits (65), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 244 PFNVIRPARNXTMCLFPXELPPRPDVLPNSAVDI 143
P + P+ + T L P EL P P VLP S D+
Sbjct: 404 PAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDL 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,364,453
Number of Sequences: 237096
Number of extensions: 1246843
Number of successful extensions: 3021
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3021
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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