Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H17
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072...    27   9.8  
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282...    27   9.8  
03_06_0040 + 31240164-31241102,31241280-31241897                       27   9.8  

>10_08_0425 -
           17806117-17806401,17806862-17806984,17807076-17807222,
           17807307-17807450,17808557-17808668,17808762-17808898,
           17809016-17809156,17810921-17811004,17811275-17811742,
           17811858-17811936,17812494-17812506,17813884-17814460,
           17814502-17814774,17814899-17815045,17815354-17815413,
           17816124-17816510
          Length = 1058

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/76 (23%), Positives = 33/76 (43%)
 Frame = +2

Query: 26  RFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQF 205
           RF + P S SR+     ++V   A     +    +R A + +K +     E H  L  + 
Sbjct: 694 RFKAIP-SHSRRRSTFEQYVRTRADEERKEKRAAQRAAVEAYKQLLEEASEGHTILIHKM 752

Query: 206 NSLTKSKDAQDFSKAW 253
             +  +KD ++F + W
Sbjct: 753 QDINSNKDYKEFKRKW 768


>05_01_0361 -
           2824728-2826043,2826288-2826507,2827616-2827702,
           2827726-2827980,2828704-2828733
          Length = 635

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 22  SPVRISSALSLSTA--HHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 183
           SP R++  L   T   HH   VR    +HR+ P+   AT  S + +G    H  +P
Sbjct: 473 SPSRVNPVLLCETGQRHHYSSVRHGDPVHRNSPQISVATSPSPIRRGD-PAHINIP 527


>03_06_0040 + 31240164-31241102,31241280-31241897
          Length = 518

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +2

Query: 104 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 259
           A+AQ    RR+APD   D+    +E    L+ + N L  + +  D+  A  W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,502,287
Number of Sequences: 37544
Number of extensions: 201621
Number of successful extensions: 795
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)