Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H17
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 34 0.12
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 30 1.9
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 30 1.9
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 2.5
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 29 3.3
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/89 (23%), Positives = 45/89 (50%)
Frame = +3
Query: 339 AKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVH 518
++E+ + ++ IE E++ +ATA +E+L++AV+ + KL K+S+
Sbjct: 936 SRESESKLQERIESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKVKISA--L 993
Query: 519 ETNXKLAPKIKAAYDDFAXNTQXVIKKIQ 605
ET K A Y+ + + +K+++
Sbjct: 994 ETKLKKAVNETKRYESSSSQLKQQVKELE 1022
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 34.3 bits (75), Expect = 0.087
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +3
Query: 312 AALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVXXNATA-LREKLQAAVQNTVQES 482
A D K ++A E+ +Q R E+ +K A+ + A LREK+Q+ + ++ S
Sbjct: 1603 ATTSDLQTKLRKAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELMETS 1662
Query: 483 XKLXXKV-SSNVHETNXKLAPKIKAAYDDFAXNTQXVIKKIQEAANAKQ 626
KL + S E KL K++A N Q + KKI E + KQ
Sbjct: 1663 EKLREDLRGSEKREEELKL--KLEAG----ESNNQAIDKKIAELSAEKQ 1705
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNT--VQESXKLXXKVSS 509
KAKEAL + + ++ T E+L+ AH + L+ K +N + +L K+
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSENVDDFESGEELQLKI-K 1887
Query: 510 NVHETNXKLAPKIKAA 557
++E N L+ +++ A
Sbjct: 1888 ELNEKNESLSSQLREA 1903
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 152 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 289
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +3
Query: 336 KAKEALEQSRQN-IERTAEE---LRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKV 503
+A++ALE++ IE EE LR DV A EKL Q TVQ+ + +
Sbjct: 704 QARQALEETMHTTIEELHEEVETLRSRLQDVG-QAKLEAEKLVQDTQATVQQQSEEVRSL 762
Query: 504 SSNVHETNXKLAPKIKAAYDDFAXNTQXVIKKIQEAANAKQ*ASILNSH 650
SS++ N +LA ++ + Q + + A+ Q AS+ S+
Sbjct: 763 SSDIDRLNLQLAEAGNLREENASLRQQLLDTEHTRASIEAQVASMQESN 811
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/97 (18%), Positives = 40/97 (41%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNV 515
+AKE E+ + + E L++ H + + +RE + +Q + + +
Sbjct: 18 RAKEETERQAELERQMNERLQELHAHMEKSDKNMREAHRKQIQEISSKHKEELQQQLERF 77
Query: 516 HETNXKLAPKIKAAYDDFAXNTQXVIKKIQEAANAKQ 626
H+ K K+K ++ +K+ E +N +Q
Sbjct: 78 HQDLKKKDAKLKTTSQEYEDRLYKTQEKLAELSNVRQ 114
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 312 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQN 467
A + + K K ++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 342 AEITEELSKEKAGNKELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 375 ERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVHE---TNXKLAPK 545
++ EEL A + + EKL + + ++E+ + V N+ E + K A K
Sbjct: 655 QKLIEELEIAQNKIQTMRSQYEEKL-VLLTHKIKETEEERDHVLKNIKEHDSESSKQAAK 713
Query: 546 IKAAYDDFAXNTQXVIKKIQEA 611
+K Y+ Q +KK+Q A
Sbjct: 714 LKEEYEKKLGGLQTELKKVQAA 735
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,991,922
Number of Sequences: 59808
Number of extensions: 228805
Number of successful extensions: 847
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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