Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H17
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 33 0.12
At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase carboxyl... 30 1.2
At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase carboxyl... 30 1.2
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 2.7
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 3.5
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 3.5
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 3.5
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 28 4.7
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.7
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 28 6.2
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 27 8.2
At1g23560.1 68414.m02964 expressed protein contains Pfam profile... 27 8.2
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 324 DANGKAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKV 503
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++ +
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESG 343
Query: 504 SSNVHETNXKLA 539
+ ET A
Sbjct: 344 AQKAEETKDSAA 355
>At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/89 (21%), Positives = 37/89 (41%)
Frame = +3
Query: 351 LEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVHETNX 530
L+ +QN + TAE++ A+ ++ L +++ + ++ V+ V
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 531 KLAPKIKAAYDDFAXNTQXVIKKIQEAAN 617
P + AY Q + +KI EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/89 (21%), Positives = 37/89 (41%)
Frame = +3
Query: 351 LEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVHETNX 530
L+ +QN + TAE++ A+ ++ L +++ + ++ V+ V
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 531 KLAPKIKAAYDDFAXNTQXVIKKIQEAAN 617
P + AY Q + +KI EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 25 PVRISSALSLSTAHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 183
P+R++ LS ST H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNV 515
KA + + +IE EELR HPD N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 516 HETNXKLAPKIK 551
L PK +
Sbjct: 246 EFNQEPLLPKFR 257
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNV 515
KA + + +IE EELR HPD N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 516 HETNXKLAPKIK 551
L PK +
Sbjct: 246 EFNQEPLLPKFR 257
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/101 (19%), Positives = 42/101 (41%)
Frame = +3
Query: 348 ALEQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVHETN 527
ALE ++ E + D+ T+ EKLQ+ + + +E+ ++ S E
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 528 XKLAPKIKAAYDDFAXNTQXVIKKIQEAANAKQ*ASILNSH 650
+A K++ + ++ +I++ S+L SH
Sbjct: 536 SVIA-KLEEQLTVESSKADTLVSEIEKLRAVAAEKSVLESH 575
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 360 SRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSN 512
S N+ RT ++ HP+ + +RE + + ++E+ +L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 259
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Frame = +3
Query: 321 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVXXNATALREKLQAAVQNTVQESXKLXX 497
G+ GKA+E Q+ + AEE R K E Q+A T Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 498 KVSSNVHETNXKLAPKIKAAYDDFAXNTQXVIKKIQEAAN 617
K K + + A TQ +K +A +
Sbjct: 71 KAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGD 110
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +3
Query: 354 EQSRQNIERTAEELRKAHPDVXXNATALREKLQAAVQNTVQESXKLXXKVSSNVHETNXK 533
+++ + + AEEL+ D+ EKL Q E+ + KVSS+V +
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKDKFSA 125
Query: 534 LAPKIKAAY 560
++K ++
Sbjct: 126 ATEEVKESF 134
>At1g23560.1 68414.m02964 expressed protein contains Pfam profile
PF02713: Domain of unknown function DUF220
Length = 332
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 459 VQNTVQESXKLXXKVSSNVHETNXKLAPKIKAAYDD 566
+ T+QE K K NV E + K KI+ AY++
Sbjct: 34 MNQTIQEPLKAEFKRLRNVKELSLKSVSKIETAYEE 69
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,517,766
Number of Sequences: 28952
Number of extensions: 147811
Number of successful extensions: 606
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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