Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H15
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   6.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 597 AFCLSQ*TVFSYSA 556
           AFC+ Q T+F+Y++
Sbjct: 169 AFCIPQLTIFTYTS 182


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -3

Query: 209 CQDTFTKQGPALALLEVVPSCRSSSPPLQFFLHLLHYSLN 90
           C  T     P  A++EVV      SP L    HL  Y+ N
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNLSHPFHLHGYAFN 605


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 552 CMHCKKTQFTVINRRHHCR 608
           C HC +    V N R H R
Sbjct: 40  CEHCDRQFVQVANLRRHLR 58


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 552 CMHCKKTQFTVINRRHHCR 608
           C HC +    V N R H R
Sbjct: 193 CEHCDRQFVQVANLRRHLR 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,390
Number of Sequences: 336
Number of extensions: 3434
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)