Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H13
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   3.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   5.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   5.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   5.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   5.0  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    20   8.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   8.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.7  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 152 HGSKIFNGIKGFARRVT*SQPSNSRGRLXEKL 247
           H S +FNG     + +   QP  +R R   K+
Sbjct: 36  HESTMFNGGGEIPQNIIQQQPQQARRRAFVKI 67


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +2

Query: 80  NQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIK 181
           N N  A  N + +P    +    AHG     G K
Sbjct: 151 NNNFSAEENSVSEPPANFYPWMKAHGDSSATGNK 184


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 214 WLASGYPSCKTFDSVKNFG 158
           W+++G PS K    +  FG
Sbjct: 283 WMSNGAPSAKIVLGLPTFG 301


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +2

Query: 80  NQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIK 181
           N N  A  N + +P    +    AHG     G K
Sbjct: 151 NNNFSAEENSVSEPPANFYPWMKAHGDSSATGNK 184


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 127 LPWLFDTISVSFAVLVMI 74
           L W + TIS++F + V +
Sbjct: 3   LKWYYITISMAFIIFVSL 20


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +2

Query: 80  NQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIK 181
           N N  A  N + +P    +    AHG     G K
Sbjct: 151 NNNFSAEENSVSEPPANFYPWMKAHGDSSATGNK 184


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 156 DPKFLTES 179
           DPKFLTE+
Sbjct: 64  DPKFLTEN 71


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 156 DPKFLTES 179
           DPKFLTE+
Sbjct: 64  DPKFLTEN 71


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 94  FAVLVMICMIL*LCHFDEF 38
           +   V IC ++  C F EF
Sbjct: 731 YIATVWICTLMNRCKFSEF 749


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,733
Number of Sequences: 336
Number of extensions: 1174
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)