Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H13
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49148-1|CAA89008.1|  159|Homo sapiens ribosomal protein L29 pro...    60   3e-09
U49083-1|AAC50647.1|  159|Homo sapiens HIP protein.                    60   3e-09
U10248-1|AAC50499.1|  159|Homo sapiens ribosomal protein L29 pro...    60   3e-09
BC071909-1|AAH71909.1|  161|Homo sapiens ribosomal protein L29 p...    60   3e-09
BC071663-1|AAH71663.1|  159|Homo sapiens ribosomal protein L29 p...    60   3e-09
BC070481-1|AAH70481.1|  159|Homo sapiens ribosomal protein L29 p...    60   3e-09
BC070190-1|AAH70190.1|  159|Homo sapiens ribosomal protein L29 p...    60   3e-09
BC008926-1|AAH08926.1|  159|Homo sapiens ribosomal protein L29 p...    60   3e-09
AL450405-1|CAI16223.1|  172|Homo sapiens protein ( Human DNA seq...    60   3e-09
BC119760-1|AAI19761.1|  211|Homo sapiens chromobox homolog 2 (Pc...    29   3.2  
BC119759-1|AAI19760.1|  211|Homo sapiens chromobox homolog 2 (Pc...    29   3.2  
BC004252-1|AAH04252.1|  211|Homo sapiens chromobox homolog 2 (Pc...    29   3.2  
BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.        29   4.2  
AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.                29   4.2  
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.          29   4.2  
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.          29   4.2  
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ...    29   4.2  
AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and sc...    29   4.2  
AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.     29   4.2  
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.     29   5.6  

>Z49148-1|CAA89008.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>U49083-1|AAC50647.1|  159|Homo sapiens HIP protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>U10248-1|AAC50499.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>BC071909-1|AAH71909.1|  161|Homo sapiens ribosomal protein L29
           protein.
          Length = 161

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>BC071663-1|AAH71663.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>BC070481-1|AAH70481.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>BC070190-1|AAH70190.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>BC008926-1|AAH08926.1|  159|Homo sapiens ribosomal protein L29
           protein.
          Length = 159

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 48


>AL450405-1|CAI16223.1|  172|Homo sapiens protein ( Human DNA
           sequence from clone RP11-632C17 on chromosome 6 Contains
            the gene for a novel protein similar to ribosomal
           protein L29  ).
          Length = 172

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 50  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFNGIKGFARR 196
           MAKSKNHT HNQ+RK HRNGIKKPR  R+ES      K    ++ FA++
Sbjct: 16  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMR-FAKK 63


>BC119760-1|AAI19761.1|  211|Homo sapiens chromobox homolog 2 (Pc
           class homolog, Drosophila) protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 29  VD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKI-FNGIKGFARRVT* 205
           +D +L+   + K H    QNRK  +    +PRK    S+ +  SK+   G  G+A   T 
Sbjct: 50  LDPRLLLAFQKKEHEKEVQNRKRGKRPRGRPRKLTAMSSCSRRSKLKVGGCAGYA-DPTS 108

Query: 206 SQPSNSRGRLXEKL 247
             P    GR  E L
Sbjct: 109 QHPLGVGGRQREGL 122


>BC119759-1|AAI19760.1|  211|Homo sapiens chromobox homolog 2 (Pc
           class homolog, Drosophila) protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 29  VD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKI-FNGIKGFARRVT* 205
           +D +L+   + K H    QNRK  +    +PRK    S+ +  SK+   G  G+A   T 
Sbjct: 50  LDPRLLLAFQKKEHEKEVQNRKRGKRPRGRPRKLTAMSSCSRRSKLKVGGCAGYA-DPTS 108

Query: 206 SQPSNSRGRLXEKL 247
             P    GR  E L
Sbjct: 109 QHPLGVGGRQREGL 122


>BC004252-1|AAH04252.1|  211|Homo sapiens chromobox homolog 2 (Pc
           class homolog, Drosophila) protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 29  VD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKI-FNGIKGFARRVT* 205
           +D +L+   + K H    QNRK  +    +PRK    S+ +  SK+   G  G+A   T 
Sbjct: 50  LDPRLLLAFQKKEHEKEVQNRKRGKRPRGRPRKLTAMSSCSRRSKLKVGGCAGYA-DPTS 108

Query: 206 SQPSNSRGRLXEKL 247
             P    GR  E L
Sbjct: 109 QHPLGVGGRQREGL 122


>BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 451 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 498


>AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 470 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 517


>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 470 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 517


>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 470 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 517


>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
           ATROPHIN-1. ).
          Length = 1064

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 287 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 334


>AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and
           scaffold protein protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 470 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 517


>AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.
          Length = 1319

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  TAKLTEMVSKSQGRPGTNPPLRMDPKFLTESKVLQEG*PEASQATREG 230
           ++ ++E  S   G PG+ PP + DP+ L + K+   G  E+ +++  G
Sbjct: 542 SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSG 589


>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
          Length = 1721

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 38  KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 148
           +L ++ +  +H     +R   R G  +PRK +H S+L
Sbjct: 715 ELARLQRKHDHERDESSRSPARRGPGRPRKRKHSSSL 751


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,463,236
Number of Sequences: 237096
Number of extensions: 728067
Number of successful extensions: 1748
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)