Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H12
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0250 + 10955281-10955419,10955524-10955727,10955985-109560...    31   1.1  
01_05_0021 - 17224430-17224807                                         31   1.1  
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810...    29   3.2  
09_04_0146 - 15080906-15081322,15081556-15081697,15081804-150818...    29   4.3  
06_01_0866 + 6582131-6583294                                           28   7.5  
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563     28   7.5  
02_04_0003 + 18832467-18832543,18832627-18832849,18832985-188333...    27   9.9  

>05_03_0250 +
           10955281-10955419,10955524-10955727,10955985-10956065,
           10956147-10956287,10956378-10956410,10956809-10956909,
           10957282-10957912,10959378-10959514
          Length = 488

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  MHDRGTDSVEPLQCKLLTFNSVYNDSFCC 151
           +HDR  D   PL+CK LT  S   D FCC
Sbjct: 376 LHDRVGDFNTPLRCKKLT-QSYEVDGFCC 403


>01_05_0021 - 17224430-17224807
          Length = 125

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 21 RCVERRAGGEKRVSLCTTAAR 83
          RCVE+ +GGE+R+  C  A R
Sbjct: 11 RCVEQSSGGERRIPACVEAGR 31


>09_04_0323 -
           16679565-16679939,16680328-16680660,16680721-16681032,
           16683590-16683825,16683972-16684239
          Length = 507

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = +3

Query: 270 PLGQRGVLPGSTQINRKCFREXESRRAPSAGPMLPVAAVTRRTSRTVPHTYPSSVT 437
           PL    VL GS+   R   R    RR PS+ P  P AA +    R  PHT  S +T
Sbjct: 38  PLPPAAVL-GSSPAARTRLRP---RRRPSSAPHPPPAAASTSALRPRPHTQNSELT 89


>09_04_0146 -
           15080906-15081322,15081556-15081697,15081804-15081887,
           15081982-15082039,15084038-15084572
          Length = 411

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +3

Query: 207 LTLFCLAEVSGDPFCGDIDGVPLGQRGVLPGSTQINRKCFREXESRRAPSAGPMLPVAAV 386
           L + C +E S D FC       +G+R V P          R   S   P+A P+   AA 
Sbjct: 84  LNVSCASEASNDSFCSRASTGRIGRRPVGPPGVGAAHALRRAAGSAGPPAARPVARKAAA 143

Query: 387 T 389
           +
Sbjct: 144 S 144


>06_01_0866 + 6582131-6583294
          Length = 387

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 410 NSARGASSHRRYRQHGSSG 354
           N A+G+S HR+++ HG  G
Sbjct: 354 NGAQGSSQHRQHQHHGGGG 372


>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
          Length = 571

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 301 EPGSTPRCPSGTPSMSPQKGSPDTSARQNKVNNTKA 194
           +PG  PR     P+  PQK +P  +   N V + K+
Sbjct: 519 QPGYAPRPQINRPAPQPQKHAPSGNTAPNSVTSFKS 554


>02_04_0003 +
           18832467-18832543,18832627-18832849,18832985-18833375,
           18833766-18834223,18834320-18834607,18834679-18835398
          Length = 718

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 232 TSARQNKVNNTKAKVIQPMKELKLFARATETVVIDRIE 119
           T+ R   +N+   K ++P   L  FA+  E    DRIE
Sbjct: 335 TTQRSESMNHVLKKYVKPSSSLNGFAKRYENFYNDRIE 372


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,244,621
Number of Sequences: 37544
Number of extensions: 337194
Number of successful extensions: 1059
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)