BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H10
(642 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D560E4 Cluster: PREDICTED: similar to Inter-alph... 48 2e-04
UniRef50_UPI0000D56533 Cluster: PREDICTED: similar to Inter-alph... 46 6e-04
UniRef50_Q498Q0 Cluster: Zgc:113924; n=5; Danio rerio|Rep: Zgc:1... 44 0.004
UniRef50_Q14624 Cluster: Inter-alpha-trypsin inhibitor heavy cha... 42 0.010
UniRef50_UPI0000E46E0F Cluster: PREDICTED: similar to LOC594926 ... 41 0.022
UniRef50_UPI0000D560E0 Cluster: PREDICTED: similar to Inter-alph... 41 0.029
UniRef50_Q503P4 Cluster: Zgc:110377; n=9; Euteleostomi|Rep: Zgc:... 41 0.029
UniRef50_UPI000069DBD8 Cluster: inter-alpha trypsin inhibitor he... 39 0.089
UniRef50_P79263 Cluster: Inter-alpha-trypsin inhibitor heavy cha... 39 0.089
UniRef50_UPI00005843F9 Cluster: PREDICTED: similar to inter-alph... 39 0.12
UniRef50_Q5T665 Cluster: Inter-alpha inhibitor H5; n=34; Tetrapo... 37 0.36
UniRef50_UPI0000F2DDBB Cluster: PREDICTED: similar to Inter-alph... 36 0.63
UniRef50_UPI00006A1915 Cluster: Transmembrane protein 110.; n=4;... 36 1.1
UniRef50_UPI0000E1FD23 Cluster: PREDICTED: inter-alpha (globulin... 35 1.5
UniRef50_Q5RH28 Cluster: Novel protein; n=3; Danio rerio|Rep: No... 35 1.9
UniRef50_UPI0000E460BF Cluster: PREDICTED: similar to inter-alph... 34 2.5
UniRef50_Q7ZVB9 Cluster: Inter-alpha (Globulin) inhibitor H2; n=... 34 2.5
UniRef50_UPI000065D60D Cluster: inter-alpha trypsin inhibitor he... 34 3.4
UniRef50_A6CH70 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_O45413 Cluster: Putative uncharacterized protein; n=2; ... 33 4.4
UniRef50_UPI000023E9C2 Cluster: hypothetical protein FG10495.1; ... 33 5.9
>UniRef50_UPI0000D560E4 Cluster: PREDICTED: similar to
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
(ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain
4) (Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P...; n=4; Tribolium
castaneum|Rep: PREDICTED: similar to Inter-alpha-trypsin
inhibitor heavy chain H4 precursor (ITI heavy chain H4)
(Inter-alpha-inhibitor heavy chain 4)
(Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P... - Tribolium castaneum
Length = 842
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +2
Query: 224 TTPETMVVSRSDDAETEATLDVXTVTE--GPVQPIKLTXMDVKSVISMRYAHTAIVAHVR 397
TT +V S + E++ +V E P+ P K+ M V + +S R+A T++V+ V+
Sbjct: 22 TTDRHSLVVSSTEPPKESSSEVAPNKEDVAPIVP-KIYEMKVDTNVSNRFAKTSVVSKVK 80
Query: 398 NAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQSVRQRKERXCSNISDSGITRNWCRTH 577
N A QEA F V+LPE ++ + K ++ + KE I + + R H
Sbjct: 81 NLAKTPQEATFSVVLPETAYISGFVMEIDGKSYKAYVKEKEE-AKQIYNEAVGRGQAAAH 139
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 450 TAFISGFVMTLDGXXXXXXXXXXXXXXQIYQTAVSQXXXXXXXXXXXXDSN 602
TA+ISGFVM +DG QIY AV + DSN
Sbjct: 98 TAYISGFVMEIDGKSYKAYVKEKEEAKQIYNEAVGRGQAAAHVEANARDSN 148
>UniRef50_UPI0000D56533 Cluster: PREDICTED: similar to
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
(ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain
4) (Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P...; n=5; Tribolium
castaneum|Rep: PREDICTED: similar to Inter-alpha-trypsin
inhibitor heavy chain H4 precursor (ITI heavy chain H4)
(Inter-alpha-inhibitor heavy chain 4)
(Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P... - Tribolium castaneum
Length = 698
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +2
Query: 311 VQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWK 490
+ P ++ M +++ IS R+A T I + V+N NK++EA F V+LPE++F + K
Sbjct: 6 IVPPQIYSMHIETTISNRFAKTLITSTVKNTDNKAKEAIFSVILPENAFISEFEMEIDGK 65
Query: 491 IIQSVRQRK 517
I ++ + K
Sbjct: 66 IFKAYVKEK 74
>UniRef50_Q498Q0 Cluster: Zgc:113924; n=5; Danio rerio|Rep:
Zgc:113924 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 892
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 320 IKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQ 499
I + + ++ RYA T I + V N NKSQE NF V +P+++F + K
Sbjct: 27 IDIYSFHINCTVTGRYATTVITSRVANVLNKSQEVNFEVQIPKNAFISQFRMTIDGKTYD 86
Query: 500 SVRQRKERXCSNISDS 547
++ + KE S +
Sbjct: 87 AIVKEKEEAQQEYSQA 102
>UniRef50_Q14624 Cluster: Inter-alpha-trypsin inhibitor heavy chain
H4 precursor (ITI heavy chain H4) (Inter-alpha-inhibitor
heavy chain 4) (Inter-alpha-trypsin inhibitor family
heavy chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (PK-120) (GP120) [Contains:
70 kDa inter-alpha-trypsin inhibitor heavy chain H4; 35
kDa inter-alpha- trypsin inhibitor heavy chain H4];
n=27; Eutheria|Rep: Inter-alpha-trypsin inhibitor heavy
chain H4 precursor (ITI heavy chain H4)
(Inter-alpha-inhibitor heavy chain 4)
(Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (PK-120) (GP120) [Contains:
70 kDa inter-alpha-trypsin inhibitor heavy chain H4; 35
kDa inter-alpha- trypsin inhibitor heavy chain H4] -
Homo sapiens (Human)
Length = 930
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 281 LDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
L + T I + + V S +S R+AHT + + V N AN QEA F++ LP+ +F
Sbjct: 20 LAIHQTTTAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNRANTVQEATFQMELPKKAF 78
>UniRef50_UPI0000E46E0F Cluster: PREDICTED: similar to LOC594926
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC594926 protein -
Strongylocentrotus purpuratus
Length = 870
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +2
Query: 308 PVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
PV P ++ V+S I++R+A T I A++RN A++ Q +F +LLP +S+
Sbjct: 79 PVSP-EIVRFHVESRIAVRFASTVIRAYIRNPASERQSVSFDLLLPLNSY 127
>UniRef50_UPI0000D560E0 Cluster: PREDICTED: similar to
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
(ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain
4) (Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P...; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Inter-alpha-trypsin
inhibitor heavy chain H4 precursor (ITI heavy chain H4)
(Inter-alpha-inhibitor heavy chain 4)
(Inter-alpha-trypsin inhibitor family heavy
chain-related protein) (IHRP) (Plasma kallikrein
sensitive glycoprotein 120) (P... - Tribolium castaneum
Length = 815
Score = 40.7 bits (91), Expect = 0.029
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = +2
Query: 239 MVVSRSDDAETEATLDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQ 418
+VVS ++ + E + + + + P ++ M V S IS RYA T + VRN +
Sbjct: 22 LVVSSTESPKPEN--NTTSHNDSQIIP-EIHSMHVYSNISNRYATTLVTTRVRNLNKTAA 78
Query: 419 EANFRVLLPEHSFHQRICYDSGWKIIQSVRQRKER 523
A F VLLPE++F + K+ + + KE+
Sbjct: 79 AATFSVLLPENAFMSAFEMEIDGKLYKGHVEEKEK 113
>UniRef50_Q503P4 Cluster: Zgc:110377; n=9; Euteleostomi|Rep:
Zgc:110377 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 868
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 320 IKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQ 499
I++ + V ++ R+AHT + N AN SQE F V LP+ SF + K+
Sbjct: 15 IEVQSVKVDCKVTSRFAHTVMTTKALNKANVSQEVFFEVELPKTSFITNFSMEIDGKMYT 74
Query: 500 SVRQRKER 523
V + KE+
Sbjct: 75 GVVKEKEK 82
>UniRef50_UPI000069DBD8 Cluster: inter-alpha trypsin inhibitor heavy
chain precursor 5 isoform 1; n=1; Xenopus
tropicalis|Rep: inter-alpha trypsin inhibitor heavy
chain precursor 5 isoform 1 - Xenopus tropicalis
Length = 606
Score = 39.1 bits (87), Expect = 0.089
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 341 VKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQSVRQRKE 520
V+S I RYA TA+ + N A +++E F++L+P +F ++ WK S R
Sbjct: 6 VQSTIMSRYAFTAVSCTMVNRAAEAKEGVFQMLIPAAAFVSNFTINTNWKFSNS-PTRLL 64
Query: 521 RXCS 532
R CS
Sbjct: 65 RKCS 68
>UniRef50_P79263 Cluster: Inter-alpha-trypsin inhibitor heavy chain
H4 precursor; n=7; Euteleostomi|Rep: Inter-alpha-trypsin
inhibitor heavy chain H4 precursor - Sus scrofa (Pig)
Length = 921
Score = 39.1 bits (87), Expect = 0.089
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 281 LDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
L V T I + + V S +S R+AHT + + V N + QEA F++ LP+ +F
Sbjct: 19 LAVLQSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAF 77
>UniRef50_UPI00005843F9 Cluster: PREDICTED: similar to inter-alpha
(globulin) inhibitor H3; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to inter-alpha
(globulin) inhibitor H3 - Strongylocentrotus purpuratus
Length = 222
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 260 DAETEATLDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVL 439
D+ E L PV+P K+T V++ I++R+A T + ++RN A +Q +F +L
Sbjct: 43 DSSVENFLSRFRRQTSPVRP-KVTMFHVETRIAVRFASTTVRTNIRNVATTAQVMSFDLL 101
Query: 440 LP 445
LP
Sbjct: 102 LP 103
>UniRef50_Q5T665 Cluster: Inter-alpha inhibitor H5; n=34;
Tetrapoda|Rep: Inter-alpha inhibitor H5 - Homo sapiens
(Human)
Length = 956
Score = 37.1 bits (82), Expect = 0.36
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 326 LTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQ-S 502
+T VKS I RYA T + + N A++ Q+ F++ +P +F G K+ Q
Sbjct: 51 MTEFSVKSTIISRYAFTTVSCRMLNRASEDQDIEFQMQIPAAAFITNFTMLIGDKVYQGE 110
Query: 503 VRQRKERXCSNISD 544
+ +R+++ + +
Sbjct: 111 ITEREKKSGDRVKE 124
>UniRef50_UPI0000F2DDBB Cluster: PREDICTED: similar to Inter-alpha
(globulin) inhibitor H4 (plasma Kallikrein-sensitive
glycoprotein); n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Inter-alpha (globulin) inhibitor
H4 (plasma Kallikrein-sensitive glycoprotein) -
Monodelphis domestica
Length = 819
Score = 36.3 bits (80), Expect = 0.63
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 275 ATLDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHS 454
A+L E ++ T MD + +IS R+A T I +HV N A K Q+A F+V +P +
Sbjct: 17 ASLSPIAAQEDGIEIYSFT-MDTR-IIS-RFARTTITSHVVNRAKKVQQATFQVEMPPKA 73
Query: 455 F 457
F
Sbjct: 74 F 74
>UniRef50_UPI00006A1915 Cluster: Transmembrane protein 110.; n=4;
Xenopus tropicalis|Rep: Transmembrane protein 110. -
Xenopus tropicalis
Length = 728
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 314 QPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
QP+ + +++ I+ R+A T I ++N N S+EA F V LP+ +F
Sbjct: 6 QPMIIQSLNIDCRITSRFARTIIKTELQNQLNMSREAVFDVELPKTAF 53
>UniRef50_UPI0000E1FD23 Cluster: PREDICTED: inter-alpha (globulin)
inhibitor H3 isoform 2; n=6; Amniota|Rep: PREDICTED:
inter-alpha (globulin) inhibitor H3 isoform 2 - Pan
troglodytes
Length = 865
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 293 TVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
++ EG I++ + S ++ R+AH + N A+ ++E +F V LP+ +F
Sbjct: 34 SLPEGVANGIEVYSTKINSKVTSRFAHNVVTTRAINRADTAKEVSFDVELPKTAF 88
>UniRef50_Q5RH28 Cluster: Novel protein; n=3; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 754
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 320 IKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYD-SGWKII 496
I + V+S I+ R+AHT + + V N+ ++Q F V +P+ +F + +G +
Sbjct: 65 ITVKSYKVESKITSRFAHTKVKSSVVNSGLQAQSIGFNVQIPKRAFINNFTMNVNGITFV 124
Query: 497 QSVRQR 514
SV+++
Sbjct: 125 GSVKEK 130
>UniRef50_UPI0000E460BF Cluster: PREDICTED: similar to
inter-alpha-trypsin inhibitor heavy chain3; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
inter-alpha-trypsin inhibitor heavy chain3 -
Strongylocentrotus purpuratus
Length = 1028
Score = 34.3 bits (75), Expect = 2.5
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 323 KLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSF 457
++ M V S I+ R+A T + + ++N K+ EA F ++LPE +F
Sbjct: 69 EILEMMVTSKITARFASTEVRSVLKNLDEKAAEATFTLILPEDAF 113
>UniRef50_Q7ZVB9 Cluster: Inter-alpha (Globulin) inhibitor H2; n=5;
Clupeocephala|Rep: Inter-alpha (Globulin) inhibitor H2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 308
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 320 IKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYD-SGWKII 496
I + V+S I+ R+AHT + + V N+ ++Q F V +P+ +F + +G +
Sbjct: 65 ITVKSYKVESKITSRFAHTTVKSSVVNSGLQAQSIGFNVQIPKRAFINNFTMNVNGIIFV 124
Query: 497 QSVRQR 514
SV+++
Sbjct: 125 GSVKEK 130
>UniRef50_UPI000065D60D Cluster: inter-alpha trypsin inhibitor heavy
chain precursor 5 isoform 1; n=1; Takifugu rubripes|Rep:
inter-alpha trypsin inhibitor heavy chain precursor 5
isoform 1 - Takifugu rubripes
Length = 1071
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 335 MDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKIIQS-VRQ 511
+ +K+ I RYA TA+ + N + + E F++ +P +++ G ++ QS +R
Sbjct: 14 LSIKTTIMSRYAFTAVYCAMLNRRSAASEGVFQLQIPANAYVSNFTMIIGGRVYQSEIRP 73
Query: 512 RKER 523
R+++
Sbjct: 74 REKK 77
>UniRef50_A6CH70 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 292
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 430 EIGFLRFVCSISHMRYNSRVSVSHRYHGLHIHXRQFYW-LNRSLRYCXYI 284
E+G ++F + +R ++ +S RYH + Q+YW +N + C Y+
Sbjct: 4 EVGSMKFENLLESLRVDNSEIISFRYHKIVRTINQYYWRINSDSKNCRYV 53
>UniRef50_O45413 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 802
Score = 33.5 bits (73), Expect = 4.4
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 317 PIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKII 496
P K D K + + +A + I+AH + S + R P+ + +C DSGW+I
Sbjct: 165 PKKKWTNDCKKLRPVCFAVSGILAHYADFFPYSALSVLRGFYPDLTLVTAVCVDSGWQIN 224
Query: 497 QSVRQRKERXCSNI 538
Q E C+++
Sbjct: 225 GVKVQNPEVTCNSV 238
>UniRef50_UPI000023E9C2 Cluster: hypothetical protein FG10495.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10495.1 - Gibberella zeae PH-1
Length = 289
Score = 33.1 bits (72), Expect = 5.9
Identities = 26/93 (27%), Positives = 37/93 (39%)
Frame = +2
Query: 227 TPETMVVSRSDDAETEATLDVXTVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAA 406
T +++ SD A T T + T T T V +V+S T + A
Sbjct: 58 TTSATIITTSDIAVTTTT-EFSTSTATLTSEDTTTADSVTTVLSSASTETTTLTETTTTA 116
Query: 407 NKSQEANFRVLLPEHSFHQRICYDSGWKIIQSV 505
E F+++ PEH+FH Y G KI V
Sbjct: 117 TPPLET-FQIIAPEHNFHDE--YLIGRKITSQV 146
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,617,394
Number of Sequences: 1657284
Number of extensions: 11039947
Number of successful extensions: 27660
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27653
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -