Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H10
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-575|AAF51131.1|  609|Drosophila melanogaster CG9664-PB,...    29   5.4  
AE014134-574|AAN10386.1|  609|Drosophila melanogaster CG9664-PA,...    29   5.4  
AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA...    29   7.1  
AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p pro...    28   9.4  
AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH0234...    28   9.4  
AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA...    28   9.4  
AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA...    28   9.4  

>AE014134-575|AAF51131.1|  609|Drosophila melanogaster CG9664-PB,
           isoform B protein.
          Length = 609

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 529 AASFFSLTYALYDFPSRVITNPLMKAVFRE*HPEIGFLRFVCSISHMRY 383
           A S F++  A++  PS  I   L    F   +    FLR +C +S  RY
Sbjct: 485 AGSLFTMQLAIFLVPSATIPFLLFSGFFIRLNELSWFLRPICDVSFFRY 533


>AE014134-574|AAN10386.1|  609|Drosophila melanogaster CG9664-PA,
           isoform A protein.
          Length = 609

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 529 AASFFSLTYALYDFPSRVITNPLMKAVFRE*HPEIGFLRFVCSISHMRY 383
           A S F++  A++  PS  I   L    F   +    FLR +C +S  RY
Sbjct: 485 AGSLFTMQLAIFLVPSATIPFLLFSGFFIRLNELSWFLRPICDVSFFRY 533


>AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA
           protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 183 PNKIKSCRFSDIVTVLLIFNGTIYSSWFS 97
           P   K CRF     ++++  GT+ S WF+
Sbjct: 335 PRLSKKCRFPLPAELIMVIGGTLISKWFN 363


>AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p
           protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 230 PETMVVSRSDDAETEATLDVXTVTEGPVQPIKLTXMDVKS 349
           PE+ V+    +A+ EA + +    + PV P+K T   V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


>AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH02340
           protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/42 (23%), Positives = 26/42 (61%)
 Frame = +2

Query: 293 TVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQ 418
           T TEG +Q +++    +++VI ++ +H  +  H++ + ++ Q
Sbjct: 504 TATEGQLQQLQIKFHVLQNVIRLQSSHLQLTVHIQKSRDELQ 545


>AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA
           protein.
          Length = 694

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/42 (23%), Positives = 26/42 (61%)
 Frame = +2

Query: 293 TVTEGPVQPIKLTXMDVKSVISMRYAHTAIVAHVRNAANKSQ 418
           T TEG +Q +++    +++VI ++ +H  +  H++ + ++ Q
Sbjct: 504 TATEGQLQQLQIKFHVLQNVIRLQSSHLQLTVHIQKSRDELQ 545


>AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA
           protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 230 PETMVVSRSDDAETEATLDVXTVTEGPVQPIKLTXMDVKS 349
           PE+ V+    +A+ EA + +    + PV P+K T   V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,437,469
Number of Sequences: 53049
Number of extensions: 556857
Number of successful extensions: 1355
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)