Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_H08
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 34 0.10
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 33 0.18
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 33 0.18
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 32 0.31
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.94
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.94
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 30 1.6
U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical pr... 29 3.8
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 28 6.6
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 28 6.6
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 28 6.6
Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.10
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 307
REI+ +Q G N +G+ FW + E GT TDL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEA----NNG 57
Query: 308 TYTPRLLIADLKGALKTLPQSG 373
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 307
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 308 TYTPRLLIADLKGALKTLPQSG 373
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 307
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 308 TYTPRLLIADLKGALKTLPQSG 373
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 319
REI+ +Q G N +GA FW + T + + D+ NE + Y P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVP 61
Query: 320 RLLIADLK 343
R + DL+
Sbjct: 62 RACLVDLE 69
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 307
REI+ +Q G N +G+ FW + E GT +DL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEA----NNG 57
Query: 308 TYTPRLLIADLKGALKTLPQSG 373
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 319
REI+ +Q G N +GA FW + T D+ NE Y P
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVP 61
Query: 320 RLLIADLKGALKTLPQSG 373
R ++ DL+ +SG
Sbjct: 62 RAVLVDLEPGTMDSVRSG 79
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 310
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 311 YTPRLLIADL 340
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +2
Query: 149 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 310
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 311 YTPRLLIADL 340
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +2
Query: 101 HTKNCSCI*FNLKMSTREILTLQFGH--YSNYVGAHFWNIQELSFDYS----GTATTDLN 262
+ +N +C+ F + + ++ G+ YS Y G H +Q+L+ DY+ GTA ++
Sbjct: 64 YLENHTCLKFEYNENAETAVRIRKGNGCYSLY-GMHAGEVQDLTLDYNCASFGTAVHEIM 122
Query: 263 HDILYREGQTSRNEVTY 313
H + GQ + Y
Sbjct: 123 HALGIAHGQARSDRDDY 139
>U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical
protein F28A12.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3
Query: 634 IDVKSFLITSVLILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISYCCLNRINSSEI 458
I + +FL+ ++ILI Y +S ++I I V F S++ C LN + +S I
Sbjct: 67 ISILAFLVYQIVILIQYFYSKPTLSQINFITNEG-----AVYFPSVTVCNLNPVKTSFI 120
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 359 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 261
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 359 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 261
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 408 CKSVSCASSERPPLCGRVFKAPF---KSAISN 322
CK V S E+ P CG + ++PF K A++N
Sbjct: 198 CKLVQDLSREQQPPCGLILESPFNNLKDAVTN 229
>Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical
protein F40G12.4 protein.
Length = 264
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Frame = +2
Query: 335 DLKGALKTLPQSGGLSD----------DAQETDLQWDTVXKIEXPPPEKN--QYLAAIDS 478
+L AL +P GG SD DAQ+T ++W+ ++E P KN Q +A
Sbjct: 98 ELVDALSFIPAHGGCSDTYYRLNAQRCDAQKTMMEWEIEKQLERLPKFKNSTQVIAMCRE 157
Query: 479 VQTTVAD 499
++ + D
Sbjct: 158 IKECMED 164
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 457 LVFFWRGXFYFXYCIPL*ICFLCVIR 380
L+FF+ FYF YCI + LC+IR
Sbjct: 107 LIFFFT--FYFNYCILILPLLLCLIR 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,623,438
Number of Sequences: 27780
Number of extensions: 304048
Number of successful extensions: 725
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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