Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H08
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 601 LILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISY 491
           L +I++IH    +    +   + Y++   VIF++I+Y
Sbjct: 122 LPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINY 158


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 601 LILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISY 491
           L +I++IH    +    +   + Y++   VIF++I+Y
Sbjct: 122 LPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINY 158


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 499 ISYCCLNRINSSEILVFFWRGXFYFXYCIPL 407
           ++ C  + +  +  +  F    F F YCIP+
Sbjct: 194 LTSCSFDYLTDTNEIRIFVATIFTFSYCIPM 224


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 299 NEVTYTPRLLIADLK 343
           N V + PR++I DLK
Sbjct: 137 NTVIHQPRIIIIDLK 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,450
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)