Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H04
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -2

Query: 277 YFLPPLYXCRCIIYFLS--IIY*XHRSF 200
           YF+ PL+   CI YF    II+  H  F
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIFTVHLLF 162


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 187 CIFXKNFYEXNKLYLKSK*YNDIXTMEEENTPNVSLISCMHFVQRG 324
           C +   +    K++L+   +     ++EE  P   +I  +H  +RG
Sbjct: 292 CSYATKYCHSLKIHLRRYGHTPNVVLDEEGNPCPDIIIDVHGTRRG 337


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/50 (22%), Positives = 26/50 (52%)
 Frame = +3

Query: 3   IYINARVGYKNIYALMHCILKRVKYYLRNC*LQNLFNLIKSMVTMXFNVK 152
           I+IN      N+  L +C++   + +  N    ++F + ++++ +  NVK
Sbjct: 130 IFINLPFLEHNLIRLKNCVIYFNRIFGWNILFGHIFTVCRTLIYIDDNVK 179


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 113 IKQILKSTISQIIFYTF*NAMHQCINVFV 27
           +K +LK+T+S     TF   + +  N+F+
Sbjct: 391 VKTVLKTTMSTFSDITFMRTVWKFFNIFL 419


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 181 MLCIFXKNFYEXNKLYLKSK*YNDI 255
           ML  F   F+  N LY+ ++ YN +
Sbjct: 270 MLLTFWSAFFIVNVLYICNQCYNTV 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,669
Number of Sequences: 336
Number of extensions: 2643
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)