Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_H04
         (581 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081...    29   2.7  

>01_06_0628 +
           30707353-30707548,30707846-30707958,30708090-30708197,
           30708305-30708543,30708774-30708861,30708942-30709075,
           30709285-30709498,30709671-30709759,30710194-30710262,
           30710560-30710683
          Length = 457

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 99  EVNNFSNNILHVLECNASMHKCFCIQHV 16
           E N+ +  ++H+  C AS   C C+ H+
Sbjct: 369 EANSIAWPLIHIFNCFASSSSCLCVWHM 396


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,627,718
Number of Sequences: 37544
Number of extensions: 200440
Number of successful extensions: 332
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)