Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G24
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16LL3 Cluster: Putative uncharacterized protein; n=2; ...    48   3e-04
UniRef50_Q9VJK9 Cluster: CG4455-PA; n=2; Sophophora|Rep: CG4455-...    42   0.013
UniRef50_Q0KHU2 Cluster: CG1691-PI, isoform I; n=10; Endopterygo...    36   1.1  
UniRef50_A6RY02 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_A3BRQ0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q6IGW9 Cluster: HDC04678; n=1; Drosophila melanogaster|...    33   5.9  

>UniRef50_Q16LL3 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 175

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = +1

Query: 310 YGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQXKYHIM 486
           Y  T+P   S +  +    ISAWGI+ +V+ +++ G G Y+  +CYP  C ++  Y++M
Sbjct: 77  YRSTTPSQQSTAAPKTN-RISAWGIISIVMFVIMIGAGAYWGFICYPLVCKKERNYNMM 134


>UniRef50_Q9VJK9 Cluster: CG4455-PA; n=2; Sophophora|Rep: CG4455-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 126

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 364 GISAWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQXKYHIM 486
           GIS +GI+ ++  ++V  + FYY  +CYP  C    KY  M
Sbjct: 56  GISTFGIIAIIFTVIVLCLVFYYGIICYPLLCRDDKKYRFM 96


>UniRef50_Q0KHU2 Cluster: CG1691-PI, isoform I; n=10;
           Endopterygota|Rep: CG1691-PI, isoform I - Drosophila
           melanogaster (Fruit fly)
          Length = 588

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -2

Query: 460 DKNKGSTLRNNRNPFLPLPVPRLRTQFPMQIFPHHALWCSVKVYPGKCLRTV 305
           DKN+  + RN RNP+  +P P  +  FP++I     +  ++    G  +RT+
Sbjct: 67  DKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 118


>UniRef50_A6RY02 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1626

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 274  VVGTRALGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGM 420
            VVGT  +G     G T       +  R G+GI  WG+++L V+ V+ G+
Sbjct: 1579 VVGTMTVGAG---GATETAKKKSAGVRMGMGIGGWGLLYLQVSFVLLGL 1624


>UniRef50_A3BRQ0 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 288

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 312 RRHFPGYTFTEHHKAWCGNICMG 380
           RRH P  TF+E H+A+C  ICMG
Sbjct: 141 RRH-PDLTFSEVHEAFCNGICMG 162


>UniRef50_Q6IGW9 Cluster: HDC04678; n=1; Drosophila
           melanogaster|Rep: HDC04678 - Drosophila melanogaster
           (Fruit fly)
          Length = 179

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/45 (35%), Positives = 17/45 (37%)
 Frame = +3

Query: 285 QGSREG*TVRRHFPGYTFTEHHKAWCGNICMGNCVLSRGTGSGRN 419
           Q S  G +  R  P     EHH  WC   C       RG  SG N
Sbjct: 135 QSSDNGQSATRLCPWTAVREHHVQWCSKACSSGEHRDRGADSGHN 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,994,118
Number of Sequences: 1657284
Number of extensions: 12915303
Number of successful extensions: 32520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32490
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)