Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_G23
(504 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 30 0.94
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 1.6
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 28 3.8
SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 28 5.0
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032) 28 5.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 27 6.6
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 6.6
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 27 6.6
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 27 8.8
SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6) 27 8.8
SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.9 bits (69), Expect = 0.31
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 383 GAPRPCARCSASTVPKPXWPCRSRLRALHWRLLAKALSCCSTDSEPSFQA 234
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 139 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 276
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 0.71
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 371 PCARCSASTVPKPXWPCRSRLRALHWRLLAKALSCCSTDSEPSFQALL 228
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAKK 487
L Q R+N E + L+ +EK +LR++L V Q + +L K
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDK 152
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLA 481
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMA 608
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAKKVSS 496
E+ + ++ IE E++ +ATA +E+L++AV+ + KL K+S+
Sbjct: 938 ESESKLQERIESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKVKISA 992
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 317 NGKAXEAL---EQSRQNIERTAEELRKAHPDVEK 409
NGKA E + E+ IE E++RKA+ ++EK
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEK 1963
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 317 NGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLAKK 487
N + EAL+ + + +E+ + +K+ TAL+E+L + VQ +E +K
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEEKLMAEEK 698
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 362 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 466
+RT EE+R+ D+++ +RE + + +N Q+
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQ 206
>SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = +2
Query: 296 SAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXK 475
SAAL ++NG+ A +R ++ ++ R H ++ N+ + + + S
Sbjct: 185 SAALNNSNGEESFAASSTRSHVVLLGDDTRAEHVSLDNNSAIIPSNGSLDMSRQAEGSSS 244
Query: 476 LAKK 487
KK
Sbjct: 245 RKKK 248
>SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 296 SAALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 442
++ LG ++G E +E+ + I T +RK+ PD + L E L+A
Sbjct: 565 TSELGASDG---ENVEEDSKEIHLTCHSMRKSPPDTHTTSVELIESLEA 610
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 317 SRLRALHWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCSKVLWNSL 159
S L + W L + + C + D PS L +C D +SE + C K LW +L
Sbjct: 420 SALSLITWNELERGI-CGNPDVSPS--VLKSACKYGDDLSESSECIKFLWAAL 469
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 299 AALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALR-EKLQAAVQNTVQESXK 475
AAL + A + +E+ RQ ++RT E +K E N T + +K ++ T ++ K
Sbjct: 182 AALKEELELAHKTIEELRQQLDRTVEYAKK--KSCELNTTQINLDKTTGDMRITEKKLDK 239
Query: 476 LAKK 487
L KK
Sbjct: 240 LQKK 243
>SB_17728| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0032)
Length = 1293
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 299 AALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALR-EKLQAAVQNTVQESXK 475
AAL + A + +E+ RQ ++RT E +K E N T + +K ++ T ++ K
Sbjct: 130 AALKEELELAHKTIEELRQQLDRTVEYAKK--KSCELNTTQINLDKTTGDMRITEKKLDK 187
Query: 476 LAKK 487
L KK
Sbjct: 188 LQKK 191
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 353 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKLA 481
++I+ EL K + D+E+ T LRE L++ V++ + +LA
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA 1449
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 341 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 454
++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 356 KELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESXKL 478
LE + + R A E R DVE+ + +RE V+NT E ++
Sbjct: 714 LETQMEILTRQASEYRGKLVDVEEKPSRVREVHSELVENTFAEEAQI 760
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 311 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 457
+A G EAL + + T E LR H + ALR+ + A++NT
Sbjct: 8 EALGDTHEALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNT 55
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 299 AALGDANGKAXEALEQSRQNIERTAEELRK-AHPDVEKNATALREKLQAAVQNTVQESXK 475
A LGD + + + ++ +EL+K VEK A L+EK Q + V + +
Sbjct: 526 AKLGDVEMQVQAFKAEKEKEVKFIEDELKKQCKALVEKKAKELKEKYQGELNEKVNKVER 585
Query: 476 LAKK 487
+K
Sbjct: 586 TLRK 589
>SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6)
Length = 211
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 178 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 273
L Q LTK +D+S+AW G E +LQ++
Sbjct: 125 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 155
>SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 178 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 273
L Q LTK +D+S+AW G E +LQ++
Sbjct: 304 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 334
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,868,576
Number of Sequences: 59808
Number of extensions: 213479
Number of successful extensions: 967
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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