Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_G21
(538 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105054-1|AAI05055.1| 766|Homo sapiens family with sequence si... 34 0.28
BC105052-1|AAI05053.1| 766|Homo sapiens family with sequence si... 34 0.28
AL391645-2|CAI15441.1| 766|Homo sapiens family with sequence si... 34 0.28
AL365402-1|CAH73887.1| 766|Homo sapiens family with sequence si... 34 0.28
AL354771-2|CAI15426.1| 766|Homo sapiens family with sequence si... 34 0.28
AB111893-1|BAD04066.1| 766|Homo sapiens DBCCR1-like protein. 34 0.28
BC028036-1|AAH28036.1| 783|Homo sapiens family with sequence si... 34 0.37
AL035289-1|CAA22893.1| 781|Homo sapiens hypothetical protein pr... 34 0.37
AL022143-1|CAI18922.1| 783|Homo sapiens family with sequence si... 34 0.37
AK123336-1|BAC85583.1| 678|Homo sapiens protein ( Homo sapiens ... 34 0.37
AB161694-1|BAD34946.1| 783|Homo sapiens DBCCR1-like2 protein. 34 0.37
AB051534-1|BAB21838.1| 791|Homo sapiens KIAA1747 protein protein. 34 0.37
AY533200-1|AAS59847.1| 398|Homo sapiens deubiquitinating enzyme... 31 2.6
AY188990-1|AAO38845.1| 530|Homo sapiens deubiquitinating enzyme... 31 2.6
AF544012-1|AAQ11742.1| 530|Homo sapiens deubiquitinating enzyme... 31 2.6
AF544011-1|AAQ11741.1| 530|Homo sapiens deubiquitinating enzyme... 31 2.6
AY509884-1|AAR91701.1| 530|Homo sapiens deubiquitinating enzyme... 30 4.5
>BC105054-1|AAI05055.1| 766|Homo sapiens family with sequence
similarity 5, member C protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>BC105052-1|AAI05053.1| 766|Homo sapiens family with sequence
similarity 5, member C protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>AL391645-2|CAI15441.1| 766|Homo sapiens family with sequence
similarity 5, member C protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>AL365402-1|CAH73887.1| 766|Homo sapiens family with sequence
similarity 5, member C protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>AL354771-2|CAI15426.1| 766|Homo sapiens family with sequence
similarity 5, member C protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>AB111893-1|BAD04066.1| 766|Homo sapiens DBCCR1-like protein.
Length = 766
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + +CK C+ +C PE P+ ++ + + L
Sbjct: 250 YLQERFVQAALSYIACNSEGEFICKENDCWCHCGPKFPECNCPSMDIQAMEENL 303
>BC028036-1|AAH28036.1| 783|Homo sapiens family with sequence
similarity 5, member B protein.
Length = 783
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 267 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 320
>AL035289-1|CAA22893.1| 781|Homo sapiens hypothetical protein
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 265 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 318
>AL022143-1|CAI18922.1| 783|Homo sapiens family with sequence
similarity 5, member B protein.
Length = 783
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 267 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 320
>AK123336-1|BAC85583.1| 678|Homo sapiens protein ( Homo sapiens
cDNA FLJ41342 fis, clone BRAWH2001940. ).
Length = 678
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 162 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 215
>AB161694-1|BAD34946.1| 783|Homo sapiens DBCCR1-like2 protein.
Length = 783
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 267 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 320
>AB051534-1|BAB21838.1| 791|Homo sapiens KIAA1747 protein protein.
Length = 791
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 465 YLSDGF*NAALSKIK*ITNPRTVCKSKTCFPYCSKNIPEQKNPNKNVHKINKTL 304
YL + F AALS I + VCK C+ CS PE P+ ++ + +L
Sbjct: 275 YLRERFVAAALSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSL 328
>AY533200-1|AAS59847.1| 398|Homo sapiens deubiquitinating enzyme
DUB4 protein.
Length = 398
Score = 31.1 bits (67), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 346 LFRDIFGTIWKARFRFAYCSGICDLFD 426
L IFG W+++ + +C GI D FD
Sbjct: 192 LIHQIFGGYWRSQIKCLHCHGISDTFD 218
>AY188990-1|AAO38845.1| 530|Homo sapiens deubiquitinating enzyme 3
protein.
Length = 530
Score = 31.1 bits (67), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 346 LFRDIFGTIWKARFRFAYCSGICDLFD 426
L IFG W+++ + +C GI D FD
Sbjct: 192 LIHQIFGGYWRSQIKCLHCHGISDTFD 218
>AF544012-1|AAQ11742.1| 530|Homo sapiens deubiquitinating enzyme
DUB2 protein.
Length = 530
Score = 31.1 bits (67), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 346 LFRDIFGTIWKARFRFAYCSGICDLFD 426
L IFG W+++ + +C GI D FD
Sbjct: 192 LIHQIFGGYWRSQIKCLHCHGISDTFD 218
>AF544011-1|AAQ11741.1| 530|Homo sapiens deubiquitinating enzyme
DUB1 protein.
Length = 530
Score = 31.1 bits (67), Expect = 2.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 346 LFRDIFGTIWKARFRFAYCSGICDLFD 426
L IFG W+++ + +C GI D FD
Sbjct: 192 LIHQIFGGYWRSQIKCLHCHGISDTFD 218
>AY509884-1|AAR91701.1| 530|Homo sapiens deubiquitinating enzyme 3
protein.
Length = 530
Score = 30.3 bits (65), Expect = 4.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 346 LFRDIFGTIWKARFRFAYCSGICDLFD 426
L IFG W+++ + +C GI D FD
Sbjct: 192 LIHQIFGGCWRSQIKCLHCHGIPDTFD 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,306,294
Number of Sequences: 237096
Number of extensions: 1539963
Number of successful extensions: 2777
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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