Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G21
         (538 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62400.1 68414.m07040 protein kinase, putative similar to pro...    32   0.28 
At3g61960.1 68416.m06959 protein kinase family protein contains ...    30   0.85 
At3g52940.2 68416.m05836 C-14 sterol reductase / delta(14)-stero...    29   2.0  
At3g52940.1 68416.m05835 C-14 sterol reductase / delta(14)-stero...    29   2.0  
At1g60050.1 68414.m06765 nodulin-related low similarity to MtN21...    28   4.5  
At3g01720.1 68416.m00107 expressed protein                             27   6.0  

>At1g62400.1 68414.m07040 protein kinase, putative similar to
           protein kinase gi|170047|gb|AAA34002; contains protein
           kinase domain, Pfam:PF00069
          Length = 345

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 496 LLSCKHTPASLFVRRFLKCGSIENQINHKSPNSMQIENVLSI 371
           + +CK  P    +  ++  G++   +N K P S+ IE VL +
Sbjct: 106 IAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRL 147


>At3g61960.1 68416.m06959 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 626

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 194 LYRMPPTPPIFDGNYLKTIFGKIIRESGKLKFPRHAGTRYYPSYVE 57
           L+++    P FDGN    +F  I+R++ +LKFP       +P  V+
Sbjct: 199 LFQLVTGKPPFDGNNHIQLFHNIVRDT-ELKFPEDTRNEIHPDCVD 243


>At3g52940.2 68416.m05836 C-14 sterol reductase / delta(14)-sterol
           reductase / FACKEL (FK) identical to gi:9082182
          Length = 262

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +3

Query: 306 VFYLFCAHFYLDFFVPGYF----WNNMESTFSICILFGDL*FI*FS 431
           ++ +FCA + LD+FV   +    W+ +       ++FGDL +I F+
Sbjct: 179 LYQIFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFT 224


>At3g52940.1 68416.m05835 C-14 sterol reductase / delta(14)-sterol
           reductase / FACKEL (FK) identical to gi:9082182
          Length = 369

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +3

Query: 306 VFYLFCAHFYLDFFVPGYF----WNNMESTFSICILFGDL*FI*FS 431
           ++ +FCA + LD+FV   +    W+ +       ++FGDL +I F+
Sbjct: 179 LYQIFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFT 224


>At1g60050.1 68414.m06765 nodulin-related low similarity to MtN21
           [Medicago truncatula] GI:2598575; contains Pfam profile
           PF00892: Integral membrane protein
          Length = 374

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 140 IFGKIIRESGKLKFPRHAGTRYYPSYVEFRL*W 42
           IFG IIR S ++K  +  G  Y P +  F + W
Sbjct: 270 IFGSIIRTSVQVKCSKMKGPYYVPLFKPFGILW 302


>At3g01720.1 68416.m00107 expressed protein
          Length = 802

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 59  LHTTGSNACRRVAETLIFQIREL-FFQILFLNSCRRKLAALEAYGKVL 199
           LHT    AC +V   +I  I +L  F + +L   +   A  E YGK L
Sbjct: 530 LHTRNPEACDKVGGVIIMHIEDLRKFAMYWLLKTQEVRADKEHYGKEL 577


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,723,610
Number of Sequences: 28952
Number of extensions: 240803
Number of successful extensions: 601
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)