Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G20
         (463 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0115 - 1426573-1426590,1426838-1426912,1427106-1427464,142...    27   7.3  

>10_01_0115 -
           1426573-1426590,1426838-1426912,1427106-1427464,
           1427551-1427656,1428091-1428207,1428319-1428420,
           1428520-1428613,1428697-1428746,1429029-1429106,
           1429189-1429455,1429573-1429672,1429757-1430039,
           1430312-1430357
          Length = 564

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 109 ERKVKNVTFPVT*TKYTVLSIQVYILKW-QKIRHRVRRMXRKSNLKSLSCSD 261
           E++  NV +     K  ++S++   +   QK+RH +++  R S + S+S +D
Sbjct: 24  EKRKSNVEYSEDEKKAKIMSLKKKAMSSSQKLRHSMKKGRRSSKVMSISIAD 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,167,030
Number of Sequences: 37544
Number of extensions: 169429
Number of successful extensions: 398
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)