Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G20
         (463 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical pr...    30   0.70 
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81039-8|CAB02779.2|  225|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical
           protein ZK418.6 protein.
          Length = 825

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 SNXXSQKMKHRPKVSLKALQKNPIPPPAHKKEXLIPD 415
           S+  ++K +HR     +++   P+PPPA     + PD
Sbjct: 584 SSQSNKKRRHRGATRTRSISSPPLPPPAPPNSFMSPD 620


>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
            C09G5.8 protein.
          Length = 1531

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326  MKHRPKVSLKALQKNPI-PPPAHKKEXLIPDTFIKEPNXQDYSP 454
            +KH PK  LK ++  PI P P  +       T +KE    D  P
Sbjct: 1037 LKHEPKEPLKEVKDTPILPQPVRRTSKEFVVTPVKEAELHDAEP 1080


>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
            C09G5.8 protein.
          Length = 1531

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326  MKHRPKVSLKALQKNPI-PPPAHKKEXLIPDTFIKEPNXQDYSP 454
            +KH PK  LK ++  PI P P  +       T +KE    D  P
Sbjct: 1037 LKHEPKEPLKEVKDTPILPQPVRRTSKEFVVTPVKEAELHDAEP 1080


>Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical
           protein F33H1.5 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -3

Query: 149 VYVTGNVTFFTLRSVVGLYYLIYLCVYLRTLFVVELF 39
           + V+GN T  T+ S++ ++Y+   CV +   F++  F
Sbjct: 198 IVVSGNTTVLTIPSLIAIFYMTMPCVPI--YFIIHYF 232


>Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical
           protein C02F4.2c protein.
          Length = 597

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = +1

Query: 97  KPTTERKVKNVTFPVT*TKYTVLSIQVYILKWQKIRHRVRR 219
           K  TER VK V FPV+  + TV   QVY  +  K RH V R
Sbjct: 35  KQFTERFVKTVQFPVS-ERLTV--DQVYDRRTGKPRHEVLR 72


>Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical
           protein C02F4.2b protein.
          Length = 558

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = +1

Query: 97  KPTTERKVKNVTFPVT*TKYTVLSIQVYILKWQKIRHRVRR 219
           K  TER VK V FPV+  + TV   QVY  +  K RH V R
Sbjct: 35  KQFTERFVKTVQFPVS-ERLTV--DQVYDRRTGKPRHEVLR 72


>Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical
           protein C02F4.2a protein.
          Length = 535

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = +1

Query: 97  KPTTERKVKNVTFPVT*TKYTVLSIQVYILKWQKIRHRVRR 219
           K  TER VK V FPV+  + TV   QVY  +  K RH V R
Sbjct: 35  KQFTERFVKTVQFPVS-ERLTV--DQVYDRRTGKPRHEVLR 72


>Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical
           protein ZK757.1 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 183 NVNLNT*YSIFSLCYGKCNIFHFAFCSWFILFNLFMCLPSNFIC 52
           N++LNT  +   L Y     F F+     ++FNLF+C+   FIC
Sbjct: 5   NISLNT-ITTTPLTYRDRITFEFSVHGTCVVFNLFLCI--FFIC 45


>Z81039-8|CAB02779.2|  225|Caenorhabditis elegans Hypothetical
           protein C25D7.10 protein.
          Length = 225

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = -3

Query: 170 ILNTVYLVYVTGNVTFFT---LRSVVGLYYL-IYLCVYL 66
           +++ ++L+Y  GN+T F    +R  V  + + +YLCV L
Sbjct: 38  VVSVIFLIYAIGNMTLFITPGVREFVQQFKIFLYLCVPL 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,432,799
Number of Sequences: 27780
Number of extensions: 174169
Number of successful extensions: 592
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)