Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G20
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   2.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   2.8  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   8.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.5  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 47  QLQIKFEGKHINRLNSINQLQN 112
           QL++ F+G +IN   + N + +
Sbjct: 33  QLEVNFDGNYINNFETSNGISH 54


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 398 LSCGPAAVWDSFEVLSVILSAGVSSFGXSNY 306
           LS  PA +     VL+V LSA     G S+Y
Sbjct: 172 LSKAPAQIPVDVLVLTVTLSASAMVLGLSSY 202


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 10  RNYFYEWKLV 39
           +NY YEW+L+
Sbjct: 85  QNYPYEWQLI 94


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   RXVRNYFYEWKLVNNST 51
           R +RNY++E   ++ +T
Sbjct: 388 RLIRNYYFESNKIDETT 404


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
          protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 19 FYEWKLVNNSTTNKVR 66
          +Y+ K + NSTT  V+
Sbjct: 4  YYQMKQITNSTTMSVK 19


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   RXVRNYFYEWKLVNNST 51
           R +RNY++E   ++ +T
Sbjct: 388 RLIRNYYFESNKIDETT 404


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,530
Number of Sequences: 438
Number of extensions: 2610
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)