Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G19
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   274   1e-75
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.56 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.56 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   5.3  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   9.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  274 bits (673), Expect = 1e-75
 Identities = 131/176 (74%), Positives = 151/176 (85%)
 Frame = +1

Query: 40  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 219
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 220 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVY 399
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VY
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVY 124

Query: 400 NAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKVDTFQSVYXKLTG 567
           +AILEDLVFPAE+V KRIRVKLDGSQLI VHLD NQQTTIEHKVDTF SVY KLTG
Sbjct: 125 DAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTG 180


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 337 HKTRVANKQKRPRSXTLTSVYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTT 516
           H     N   +     L S YN ++  +V  ++++  R+ +KL  SQLI V+L     TT
Sbjct: 19  HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNLKNQIMTT 76


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 337 HKTRVANKQKRPRSXTLTSVYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTT 516
           H     N   +     L S YN ++  +V  ++++  R+ +KL  SQLI V+L     TT
Sbjct: 19  HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNLKNQIMTT 76


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 385 LTSVYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTT 516
           L S YN ++  +V   + +   +++KL  SQLI V+L     TT
Sbjct: 31  LLSNYNKLVRPVVNVTDALT--VKIKLKLSQLIDVNLKNQIMTT 72


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 282 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 196
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 173 KLNYTIRSRSSSMCR 217
           + N TIRSRSSS+ R
Sbjct: 271 RTNSTIRSRSSSLSR 285


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 405  SIVHRGQCX*AWPLLFVSNTSFV 337
            SIVHR +     PLL V+  +FV
Sbjct: 1012 SIVHRQEIEDMLPLLLVATCAFV 1034


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,957
Number of Sequences: 2352
Number of extensions: 10162
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)