Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G19
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   267   8e-72
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   267   8e-72
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   267   8e-72
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   267   8e-72
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   247   9e-66
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   247   9e-66
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    30   2.5  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  267 bits (654), Expect = 8e-72
 Identities = 131/178 (73%), Positives = 151/178 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKVDTFQSVYXKLTG 567
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKVDTF SVY KLTG
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  267 bits (654), Expect = 8e-72
 Identities = 131/178 (73%), Positives = 151/178 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKVDTFQSVYXKLTG 567
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKVDTF SVY KLTG
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  267 bits (654), Expect = 8e-72
 Identities = 131/178 (73%), Positives = 151/178 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKVDTFQSVYXKLTG 567
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKVDTF SVY KLTG
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  267 bits (654), Expect = 8e-72
 Identities = 131/178 (73%), Positives = 151/178 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKVDTFQSVYXKLTG 567
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKVDTF SVY KLTG
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  247 bits (604), Expect = 9e-66
 Identities = 121/166 (72%), Positives = 141/166 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKV 531
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  247 bits (604), Expect = 9e-66
 Identities = 121/166 (72%), Positives = 141/166 (84%)
 Frame = +1

Query: 34  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 213
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 214 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 393
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 394 VYNAILEDLVFPAEIVXKRIRVKLDGSQLIXVHLDXNQQTTIEHKV 531
           VY+AILEDLVFPAEIV KRIRVKLDGSQL+ VHLD NQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/66 (27%), Positives = 35/66 (53%)
 Frame = +1

Query: 187 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 366
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 367 RPRSXT 384
           +P + T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,895,464
Number of Sequences: 53049
Number of extensions: 440891
Number of successful extensions: 1115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)