Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G18
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   8.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 492 KMLKGLNVLLFEIYLLKS*LTVD 560
           K +K L +LLFE  LL S  T+D
Sbjct: 646 KAVKDLVILLFETALLSSGFTLD 668


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 277 VVLVNVICDGVYXYSGYNFPFDCAFIPGTMH 185
           V L+ ++C  +Y +   +  F CAFI  TMH
Sbjct: 250 VHLLLLVC--IYYFYYMHLLFCCAFIIFTMH 278


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 63  LYCF*CFIISL*YVFFL*M*AQRWRKKWNTXYXNFT 170
           LY    F+I++ YV  L      WR+++   +  +T
Sbjct: 99  LYYLLLFVINVLYVLTLCYAVYYWRQQYEDFWHRYT 134


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 380 PFTRNGKNLDENDP 421
           PF R  +NLD N P
Sbjct: 552 PFERTFRNLDANRP 565


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 389 RNGKNLDEND 418
           RNGK+LD++D
Sbjct: 191 RNGKDLDDDD 200


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 242 INTVANDVYKYNFPETLLFTKNI 310
           I +   DVY +NF + + +  NI
Sbjct: 122 IRSRETDVYTHNFVKDIFYPANI 144


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 540 STNKFRTVEHSNPLTFSIKI 481
           ++N+F  V HS  +T SI++
Sbjct: 142 TSNEFIRVHHSGSITRSIRL 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,603
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)