Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G18
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-P...   172   3e-43
AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p pro...   156   2e-38
AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-P...   149   2e-36
AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA (5-cytos...   149   4e-36

>AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-PC,
           isoform C protein.
          Length = 345

 Score =  172 bits (419), Expect = 3e-43
 Identities = 79/166 (47%), Positives = 112/166 (67%)
 Frame = +2

Query: 143 MEHXILXLYSGIGGMHCAWNESTIKGKVVXAIXINTVANDVYKYNFPETLLFTKNIQSLT 322
           M   +L L+SGIGGMH A+N + + G++V A+ +NTVAN VY +N+   L+ T+NIQSL+
Sbjct: 1   MVFRVLELFSGIGGMHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLS 60

Query: 323 PIXIXKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIXILXKLNTLQYILMENVK 502
              + K + + +LMSPPCQP TR G   D  D R+++  +   ++ +   L+YILMENVK
Sbjct: 61  VKEVTKLQANMLLMSPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVK 120

Query: 503 GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 640
           GFE S  RN F+E L   GF ++EF+L+P    VPN+R RYYCIA+
Sbjct: 121 GFESSQARNQFIESLERSGFHWREFILTPTQFNVPNTRYRYYCIAR 166


>AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p
           protein.
          Length = 331

 Score =  156 bits (379), Expect = 2e-38
 Identities = 71/152 (46%), Positives = 102/152 (67%)
 Frame = +2

Query: 185 MHCAWNESTIKGKVVXAIXINTVANDVYKYNFPETLLFTKNIQSLTPIXIXKYKIDTVLM 364
           MH A+N + + G++V A+ +NTVAN VY +N+   L+ T+NIQSL+   + K + + +LM
Sbjct: 1   MHYAFNYAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLM 60

Query: 365 SPPCQPFTRNGKNLDENDPRTNSFLYFIXILXKLNTLQYILMENVKGFECSTVRNLFVEK 544
           SPPCQP TR G   D  D R+++  +   ++ +   L+YILMENVKGFE S  RN F+E 
Sbjct: 61  SPPCQPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIES 120

Query: 545 LTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 640
           L   GF ++EF+L+P    VPN+R RYYCIA+
Sbjct: 121 LERSGFHWREFILTPTQFNVPNTRYRYYCIAR 152


>AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-PA,
           isoform A protein.
          Length = 345

 Score =  149 bits (362), Expect = 2e-36
 Identities = 67/148 (45%), Positives = 99/148 (66%)
 Frame = +2

Query: 197 WNESTIKGKVVXAIXINTVANDVYKYNFPETLLFTKNIQSLTPIXIXKYKIDTVLMSPPC 376
           + ++ + G++V A+ +NTVAN VY +N+   L+ T+NIQSL+   + K + + +LMSPPC
Sbjct: 19  FEDAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPC 78

Query: 377 QPFTRNGKNLDENDPRTNSFLYFIXILXKLNTLQYILMENVKGFECSTVRNLFVEKLTYC 556
           QP TR G   D  D R+++  +   ++ +   L+YILMENVKGFE S  RN F+E L   
Sbjct: 79  QPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERS 138

Query: 557 GFVYQEFMLSPVSVGVPNSRLRYYCIAK 640
           GF ++EF+L+P    VPN+R RYYCIA+
Sbjct: 139 GFHWREFILTPTQFNVPNTRYRYYCIAR 166


>AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA
           (5-cytosine) methyltransferasehomolog protein.
          Length = 345

 Score =  149 bits (360), Expect = 4e-36
 Identities = 67/148 (45%), Positives = 99/148 (66%)
 Frame = +2

Query: 197 WNESTIKGKVVXAIXINTVANDVYKYNFPETLLFTKNIQSLTPIXIXKYKIDTVLMSPPC 376
           + ++ + G++V A+ +NTVAN VY +N+   L+ T+NIQSL+   + K + + +LMSPPC
Sbjct: 19  FEDAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPC 78

Query: 377 QPFTRNGKNLDENDPRTNSFLYFIXILXKLNTLQYILMENVKGFECSTVRNLFVEKLTYC 556
           QP TR G   D  D R+++  +   ++ +   L+YILMENVKGFE S  RN F+E L   
Sbjct: 79  QPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERP 138

Query: 557 GFVYQEFMLSPVSVGVPNSRLRYYCIAK 640
           GF ++EF+L+P    VPN+R RYYCIA+
Sbjct: 139 GFHWREFILTPTQFNVPNTRYRYYCIAR 166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,769,419
Number of Sequences: 53049
Number of extensions: 494328
Number of successful extensions: 847
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)