SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G16
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;...    42   0.012
UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2; Catarrhini...    38   0.19 
UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protei...    38   0.19 
UniRef50_P15847 Cluster: Trafficking protein particle complex su...    36   0.57 
UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gamb...    36   1.0  
UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -...    35   1.8  
UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|R...    34   2.3  
UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1 RNA-b...    34   2.3  
UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protei...    34   3.1  
UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xeno...    33   4.0  
UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ ...    33   4.0  
UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intro...    33   7.1  
UniRef50_P72877 Cluster: Exopolysaccharide export protein; n=1; ...    33   7.1  
UniRef50_A6QQ78 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aed...    33   7.1  
UniRef50_A7RTY8 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.1  
UniRef50_A7HK60 Cluster: ABC transporter related; n=2; Thermotog...    32   9.3  
UniRef50_A4RUB2 Cluster: Predicted protein; n=1; Ostreococcus lu...    32   9.3  

>UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG4170-PA - Nasonia vitripennis
          Length = 437

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 16/32 (50%), Positives = 25/32 (78%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDALKAREQ 261
           +EN+Y + V N+++L LD++ DPL+ LK REQ
Sbjct: 1   MENTYSITVTNKFSLALDEDEDPLEILKLREQ 32


>UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2;
           Catarrhini|Rep: Isoform 2 of Q5JVS0 - Homo sapiens
           (Human)
          Length = 308

 Score = 37.9 bits (84), Expect = 0.19
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 148 SSRGSQLENSYGVGVVNRYALFLDDETDPLDALKAREQ 261
           ++ G+ ++ S+G  V NR+   LDDE+DP D L+  E+
Sbjct: 10  AAAGAAMQESFGCVVANRFHQLLDDESDPFDILREAER 47


>UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protein
           4; n=14; Eutheria|Rep: Intracellular hyaluronan-binding
           protein 4 - Homo sapiens (Human)
          Length = 413

 Score = 37.9 bits (84), Expect = 0.19
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 148 SSRGSQLENSYGVGVVNRYALFLDDETDPLDALKAREQ 261
           ++ G+ ++ S+G  V NR+   LDDE+DP D L+  E+
Sbjct: 10  AAAGAAMQESFGCVVANRFHQLLDDESDPFDILREAER 47


>UniRef50_P15847 Cluster: Trafficking protein particle complex
           subunit 5; n=10; Apicomplexa|Rep: Trafficking protein
           particle complex subunit 5 - Plasmodium falciparum
          Length = 184

 Score = 36.3 bits (80), Expect = 0.57
 Identities = 16/44 (36%), Positives = 30/44 (68%)
 Frame = +1

Query: 43  NRSAILNEINKIRQNVALLAARKVIQLTSKYCVIKSSRGSQLEN 174
           ++S+I  E+N+I+Q+V+L A   +     +YC+ KS RG ++E+
Sbjct: 4   SKSSIEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIED 47


>UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000009724 - Anopheles gambiae
           str. PEST
          Length = 445

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
 Frame = +1

Query: 166 LEN-SYGVGVVNRYALFL--DDETDPLDALKAREQ 261
           +EN SYG+ V NRY LF   DDE DP++A+   +Q
Sbjct: 1   MENTSYGINVANRYDLFCIDDDEGDPIEAILKSKQ 35


>UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -
           Fugu rubripes (Japanese pufferfish) (Takifugu rubripes)
          Length = 361

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDALKAREQ 261
           L +++G  V NR+   LDD+ DPLD L   E+
Sbjct: 2   LPDAFGCAVANRFGNLLDDDADPLDLLSEAEK 33


>UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|Rep:
           MGC68500 protein - Xenopus laevis (African clawed frog)
          Length = 404

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 160 SQLENSYGVGVVNRYALFLDDETDPLDAL 246
           +++++++G  V NR+   LDDE+DPLD L
Sbjct: 16  TEMQDNFGCAVGNRFHQLLDDESDPLDFL 44


>UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1
           RNA-binding protein; n=54; Euteleostomi|Rep: Plasminogen
           activator inhibitor 1 RNA-binding protein - Homo sapiens
           (Human)
          Length = 408

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDALKARE 258
           L+  +G  V NR+    DDE+DP + LKA E
Sbjct: 5   LQEGFGCVVTNRFDQLFDDESDPFEVLKAAE 35


>UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protein
           4; n=2; Gallus gallus|Rep: Intracellular
           hyaluronan-binding protein 4 - Gallus gallus (Chicken)
          Length = 357

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDALKAREQ 261
           +E S+   V NR+   LDDE+DP D L+  E+
Sbjct: 14  MEGSFSCTVANRFYQLLDDESDPFDNLREAER 45


>UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xenopus
           tropicalis|Rep: Hyaluronan binding protein 4 - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 339

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDAL 246
           +++++G  V NR+   LDDE+DPLD L
Sbjct: 1   MQDNFGCAVENRFNQLLDDESDPLDFL 27


>UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ
            family-like protein; n=3; Leishmania|Rep: ATP-dependent
            DEAD/H DNA helicase recQ family-like protein - Leishmania
            major
          Length = 1003

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 350  PPGRALRKLKM*SLKTSKVENNR-RVRDLHARSIVMLSVRLRVVVKIGR 493
            PPGR L K+K  SL  + VE NR R+   +     +L +R R +++ G+
Sbjct: 910  PPGRGLGKMKAVSLVNAFVEENRLRIHSTYEALRALLGIRPRSLIQHGK 958


>UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intronic
           gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to vasa intronic gene CG4170-PA,
           isoform A - Apis mellifera
          Length = 414

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 166 LENSYGVGVVNRYALFLDDETDPLDALKARE 258
           +EN Y + V N+++L L D+ DP + L+  E
Sbjct: 1   MENMYSIAVTNKFSLALGDDEDPHEKLREEE 31


>UniRef50_P72877 Cluster: Exopolysaccharide export protein; n=1;
           Synechocystis sp. PCC 6803|Rep: Exopolysaccharide export
           protein - Synechocystis sp. (strain PCC 6803)
          Length = 756

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/60 (28%), Positives = 35/60 (58%)
 Frame = +1

Query: 34  SCSNRSAILNEINKIRQNVALLAARKVIQLTSKYCVIKSSRGSQLENSYGVGVVNRYALF 213
           +  N S+ LNEIN +RQN+++    K+ QLT+K   ++   G    +++G+  + +  ++
Sbjct: 230 TAENLSSRLNEINVLRQNLSI----KIQQLTAKRDALEQKTGIDNNSAFGLSSLGQSPVY 285


>UniRef50_A6QQ78 Cluster: Putative uncharacterized protein; n=1; Bos
           taurus|Rep: Putative uncharacterized protein - Bos
           taurus (Bovine)
          Length = 403

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 238 QEDRSHRPRKERICSLLPHRRNSPVVI 158
           Q   S RPRK +I  LLP RRN P+++
Sbjct: 345 QSSDSFRPRKRKIPLLLPTRRNGPLIL 371


>UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aedes
           aegypti|Rep: Putative mRNA binding protein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 419

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
 Frame = +1

Query: 166 LEN-SYGVGVVNRYALF-LDDE-TDPLDALKAREQ 261
           +EN SYG+ V NRY LF +DDE  DP + +  ++Q
Sbjct: 1   MENTSYGINVANRYDLFSIDDEGDDPFETITQKKQ 35


>UniRef50_A7RTY8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 405

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 178 YGVGVVNRYALFLDDETDPLDALKAREQA 264
           Y +GV NR+ L L DE DP    K  E+A
Sbjct: 6   YSIGVNNRFGLLLSDEEDPETTFKESEKA 34


>UniRef50_A7HK60 Cluster: ABC transporter related; n=2;
           Thermotogaceae|Rep: ABC transporter related -
           Fervidobacterium nodosum Rt17-B1
          Length = 273

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = +1

Query: 49  SAILNEINKIRQNVALLAARKVIQL------TSKYCVIKSSRGSQLE 171
           S IL+E+ K+   VA++   K+I++        KYC IK  +G ++E
Sbjct: 173 SHILSEVEKVADKVAIMNKGKIIEIGYLDDIKEKYCAIKVEKGKKVE 219


>UniRef50_A4RUB2 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 551

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 301 LFRLLWSSF*APSPALALLTHQEDRSHRPRKERICSLLPHRRNSPVV 161
           + R LW+S   P  AL+L  HQE R   P    +C L  H   S +V
Sbjct: 321 IVRTLWASVLFPLAALSLAPHQEPRFLTPMILPMCVLAAHYSRSTLV 367


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.312    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,761,453
Number of Sequences: 1657284
Number of extensions: 8546314
Number of successful extensions: 12696
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12696
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

- SilkBase 1999-2023 -