Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G12
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p pro...   180   2e-45
AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA...   180   2e-45
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   7.2  

>AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p
           protein.
          Length = 190

 Score =  180 bits (437), Expect = 2e-45
 Identities = 89/168 (52%), Positives = 108/168 (64%), Gaps = 4/168 (2%)
 Frame = +1

Query: 106 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEIST 273
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLFWR+H++++  
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWP 62

Query: 274 AIIWFIXXXXXXXXXXXXXYRNTKFQLKHXXXXXXXXXXXXXMSXXXXXXXXXXXXXXXE 453
           + I F+             Y+N KFQLKH             ++               E
Sbjct: 63  SSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDE 122

Query: 454 RILWKKNEVAXYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYI 597
           RILWKKNEVA YEATT+SIFYNNA++L ++I  SF+IL+  TP +NYI
Sbjct: 123 RILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYI 170


>AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA
           protein.
          Length = 190

 Score =  180 bits (437), Expect = 2e-45
 Identities = 89/168 (52%), Positives = 108/168 (64%), Gaps = 4/168 (2%)
 Frame = +1

Query: 106 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEIST 273
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLFWR+H++++  
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWP 62

Query: 274 AIIWFIXXXXXXXXXXXXXYRNTKFQLKHXXXXXXXXXXXXXMSXXXXXXXXXXXXXXXE 453
           + I F+             Y+N KFQLKH             ++               E
Sbjct: 63  SSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDE 122

Query: 454 RILWKKNEVAXYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYI 597
           RILWKKNEVA YEATT+SIFYNNA++L ++I  SF+IL+  TP +NYI
Sbjct: 123 RILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYI 170


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 585   CRCECTQNVE-TAQDDNSQEKCVIVEN*VCGSFIXC 481
             CR EC  N + TA    S+ KCV   N +CG +  C
Sbjct: 11595 CRRECENNDDCTAVQACSRFKCVDPCNNICGDYAIC 11630



 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 588   NCRCECTQNVETAQDDNS-QEKCVIVEN*VCGSFIXCHLI 472
             NCR EC  N E + D     ++C    +  CGS   CH+I
Sbjct: 16610 NCRPECITNSECSFDKACLNQRCRDPCSGTCGSNANCHVI 16649



 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 588   NCRCECTQNVETAQDDNS-QEKCVIVEN*VCGSFIXCHL 475
             NCR ECT N E A D      KCV     +CG    C +
Sbjct: 18762 NCRPECTLNSECAYDKACVHHKCVDPCPGICGINADCRV 18800


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,370,696
Number of Sequences: 53049
Number of extensions: 513585
Number of successful extensions: 1063
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)