Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G12
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...   101   3e-22
Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    28   5.0  
AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical...    28   5.0  
AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score =  101 bits (243), Expect = 3e-22
 Identities = 54/157 (34%), Positives = 81/157 (51%)
 Frame = +1

Query: 130 TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFIXXXXXX 309
           TKEEELLL  +S   STK +  FY NA I+S  P++LF+ VH +EI  +++ +       
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGT 64

Query: 310 XXXXXXXYRNTKFQLKHXXXXXXXXXXXXXMSXXXXXXXXXXXXXXXERILWKKNEVAXY 489
                   +N K  LKH             +S               ER L++KNEVA  
Sbjct: 65  AYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADT 124

Query: 490 EATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 600
           E+T  S+FY N+L+LTI+++S+F++L    P  N ++
Sbjct: 125 ESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +1

Query: 88  TYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFW 246
           T  +K      K F K  +++L D+    + K   +   N      +P W FW
Sbjct: 178 TLPMKKHESQKKHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFW 230


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 70  FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSAL 195
           F+KV +T L +    + K+  K  ELL++   R  STK+SAL
Sbjct: 10  FLKVDLTRLAEDDETHQKSTKKHTELLIELIDRK-STKASAL 50


>AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical
           protein Y54G2A.27 protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 510 FLQ*RTFPDYCHLEQFLH---SAYIHTYS*LHCVSHGCIWTSCSTLHRNQ 650
           +LQ    P  C L   +H   S+YI+ YS LH +SH    T+ +T   N+
Sbjct: 63  YLQMLFRPSVCPLHPSIHLSSSSYIYIYSQLHMLSHNGGPTTTTTTTPNR 112


>AL034364-2|CAA22252.1|  630|Caenorhabditis elegans Hypothetical
           protein W06D4.4 protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 142 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAII 282
           E+L       VS++   +   N    +AIP+W+ W    + +ST ++
Sbjct: 530 EILRFPIDGRVSSQKCVVNIDNMSSSNAIPMWMEWEFGGINLSTGLL 576


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 34  VLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA--FTKEEELLLQDFSRNVS 177
           +L +NS  L+F +  VK+  ++K   +N+ +  +  EE ++   FS  +S
Sbjct: 188 LLAINSVNLVFNYFLVKINTILKEKWRNSLSTRYQMEENIITTKFSTFIS 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,697,921
Number of Sequences: 27780
Number of extensions: 265514
Number of successful extensions: 657
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)