Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_G07
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92775-3|CAB62778.2| 396|Caenorhabditis elegans Hypothetical pr... 35 0.041
AB070577-1|BAC66472.1| 396|Caenorhabditis elegans L-3,4-dihydro... 35 0.041
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 31 0.67
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 31 0.67
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 31 0.89
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z92775-3|CAB62778.2| 396|Caenorhabditis elegans Hypothetical
protein C06H5.7 protein.
Length = 396
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 384 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFXXWCLFIIRRLSRIFCSGGSWRPTSFFKF 205
+ W + ++S FF+G+FWSA S+ C + +L + W+P + K+
Sbjct: 98 VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147
Query: 204 FRLRLC 187
F +R C
Sbjct: 148 FTMRRC 153
>AB070577-1|BAC66472.1| 396|Caenorhabditis elegans
L-3,4-dihydroxyphenylalanine receptorprotein.
Length = 396
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 384 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFXXWCLFIIRRLSRIFCSGGSWRPTSFFKF 205
+ W + ++S FF+G+FWSA S+ C + +L + W+P + K+
Sbjct: 98 VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147
Query: 204 FRLRLC 187
F +R C
Sbjct: 148 FTMRRC 153
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 31.1 bits (67), Expect = 0.67
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 124 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGR------PPAATRTKDSAKS 264
++D GS+ V KKGRGRP N + L K+GR P A T D+A S
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASS 162
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 130 DDGSTVVEKKGRGRPKANGTQPESKELKKRGR 225
D S+ V KKGRGRP N + L K+GR
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGR 188
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 31.1 bits (67), Expect = 0.67
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 124 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGR------PPAATRTKDSAKS 264
++D GS+ V KKGRGRP N + L K+GR P A T D+A S
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASS 162
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 130 DDGSTVVEKKGRGRPKANGTQPESKELKKRGR 225
D S+ V KKGRGRP N + L K+GR
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGR 188
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 154 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 279
K+GRGRP++ T +++ + AA R+K + ++EQ
Sbjct: 572 KRGRGRPRSRSTMSITEDSEPSTSSTAAKRSKRAESDEEEEQ 613
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 119 ELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNEVGLQLPPEQKILLSLLMMNKHXXLNE 298
E+ T + + D V+ +E +KN + + L+ +K + L+ + L++
Sbjct: 579 EIIQTPPEASSQDSDIVEAMEIEEITVKKN-QGFMSLEAAASEKPINLKLLFEETTKLDD 637
Query: 299 VEADQK-VPRKKRESRARVKVE 361
+K V RKKRES+ R K+E
Sbjct: 638 KTTKRKRVNRKKRESKKRRKIE 659
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 127 SDDGSTVVEKKGRGRPKANGT-QPESKELKKRGRPPAATRTKDSAKSSDDE 276
SD+ KK +G P G +P S RP A TK SAK + DE
Sbjct: 321 SDEDDVDFGKKKKGAPSTRGRGRPPSSN-----RPTRAAATKRSAKDASDE 366
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 8 PATAVLVSRPAINSHGNSGIACCK 79
PAT +++ RP NSH +G K
Sbjct: 70 PATQIMLLRPKFNSHNENGATTAK 93
>Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical
protein F55C5.4 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 555 LMVSKLKYLVNSHVSSNLLNYRD 623
+ +++LKYL+ SH +SNL+ +D
Sbjct: 588 MTLNRLKYLLQSHSTSNLIAMKD 610
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,947,270
Number of Sequences: 27780
Number of extensions: 218956
Number of successful extensions: 807
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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