Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G05
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   2.9  
AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4 p...    22   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 5   VSPLAPQPSKPVYPFS 52
           V PL P P  P +P++
Sbjct: 114 VPPLTPSPGPPSHPYT 129


>AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4
           protein.
          Length = 23

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 225 GGRDEGSDGNRRR 263
           GGR E S G RRR
Sbjct: 9   GGRPETSSGRRRR 21


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 321 PTVIMACHFLN 353
           P VI+ACH L+
Sbjct: 169 PNVILACHMLS 179


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 104 SPSDKGISELVLFHRPRCPSTRKNWCN 184
           +PS++ + EL    R  C     +W N
Sbjct: 295 NPSERVMRELGRIFRAYCRENHASWVN 321


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 73   QYQFFSCAERIYW 35
            +Y+ F+CA  ++W
Sbjct: 1301 KYEVFNCAPGLHW 1313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,907
Number of Sequences: 336
Number of extensions: 2094
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)