Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_G05
(525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 136 1e-32
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 2e-29
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 124 3e-29
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_33715| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.1
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 27 7.2
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 136 bits (329), Expect = 1e-32
Identities = 69/123 (56%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
Frame = +1
Query: 163 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXARRSSWRV 342
DKEE V AKLAEQAERYDDM +MKEV + G EL E+RNLLSVAY NV+ ARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 343 ISSIEQKTEGSXR---KQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPKASNPXSKVFY 513
I+SIEQK E K +M + YR +++EL IC ++L LLD LI + + SKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 514 LKM 522
K+
Sbjct: 123 NKI 125
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 129 bits (312), Expect = 1e-30
Identities = 66/124 (53%), Positives = 89/124 (71%)
Frame = +1
Query: 154 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXARRSS 333
M V +E L+ AKL+EQ +RYD+MA MKEV+E +L EERNLLSV+Y N+V RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 334 WRVISSIEQKTEGSXRKQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPKASNPXSKVFY 513
WRVISSIE+KT S + K+Y+ ++KEL +C +VLG+L++ LIP A + +KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 514 LKMK 525
K+K
Sbjct: 198 FKLK 201
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 125 bits (302), Expect = 2e-29
Identities = 64/101 (63%), Positives = 72/101 (71%)
Frame = +1
Query: 223 MAAAMKEVTETGVELXNEERNLLSVAYXNVVXARRSSWRVISSIEQKTEGSXRKQQMAKE 402
MA AMKE TE L EERNLLSVAY NVV A+RSSWRVISSIEQK EGS RK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 403 YRVKVQKELTXICYDVLGLLDKHLIPKASNPXSKVFYLKMK 525
YR ++ EL +C VL LL+ LIP A + SKVFYLKMK
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMK 101
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 124 bits (300), Expect = 3e-29
Identities = 67/131 (51%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Frame = +1
Query: 142 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXA 321
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L +EERNLLSVAY NVV A
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 322 RRSSWRVISSIEQKTEGSXRKQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPKAS---N 492
RRSSWRVISS+EQK + K+YR + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 493 PXSKVFYLKMK 525
+KVFYLKM+
Sbjct: 121 TEAKVFYLKMR 131
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 75.8 bits (178), Expect = 2e-14
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +1
Query: 154 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXARRSS 333
M + ELVQ AKLAEQ ER++D+ MK+ E L E RNLLSV Y NVV ++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 334 WRVISSIEQKTEGSXRKQQMAK--EYRVKVQKELTXICYDVL 453
WR + ++ R Q+ +Y+ K++ EL +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 130 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEER 282
+SPLPS+ +E+V KLAE+ E ++++ T+ E EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/121 (19%), Positives = 46/121 (38%)
Frame = +1
Query: 142 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXA 321
P +T V E VQ++ Y+ A+ + V G + R++L ++ +
Sbjct: 1002 PYTTKDVSLLEQVQKSAARFVTSNYNYKASTTEMVESLGWDTLEARRHMLQLSMFFKIKN 1061
Query: 322 RRSSWRVISSIEQKTEGSXRKQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPKASNPXS 501
+SI++ T S R ++ + V +C+ +D+HL S
Sbjct: 1062 NIVKIPFPTSIQENTRTSRRTDISYRQLQANVCDASFSVCHQGKRDVDRHLAGTEHRRAS 1121
Query: 502 K 504
K
Sbjct: 1122 K 1122
>SB_33715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 SPLAPQPSKPVYPFSAREKLILCLN-LLVQIHFSPSDK 118
SPL P+P+K + +AR IL N + V + P DK
Sbjct: 6 SPLPPRPNKAIVTINARTSEILMANDMAVDLFSYPRDK 43
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 382 KQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPK 483
K++M ++Y K++KE++ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +1
Query: 166 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELXNEERNLLSVAYXNVVXARRSSWRVI 345
KE+ AK ++ ER + A K+ E + EE++ L R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 346 SSIEQKTEGSXRKQQMAKEYRVKVQK 423
+ IE+K + +K+Q +E K ++
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 108 LPTRASVN*SSSIVHDVRRQGRTGA 182
+P RAS +SS +HD R+GRT A
Sbjct: 665 IPERASRRHASSALHDSLRRGRTTA 689
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,801
Number of Sequences: 59808
Number of extensions: 283539
Number of successful extensions: 741
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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