BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_G05
(525 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 27 0.39
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 25 1.2
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 25 1.2
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 23 4.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 6.3
U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles ... 23 8.3
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 23 8.3
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 27.1 bits (57), Expect = 0.39
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 334 WRVISSIEQKTEGSXRKQQMAKEYRVKVQKELTXICYDVLGLLDKHLIPKASNP 495
W+V+ ++ + K + + +V K T C V L+D LI K NP
Sbjct: 274 WKVMKDVKDFIKLLLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKIGNP 327
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 222 HGGRDEGSDGNRRRTXQRGEEPPFSCL*XCR 314
HGG D D + EE PF C CR
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKCY-VCR 251
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 222 HGGRDEGSDGNRRRTXQRGEEPPFSCL*XCR 314
HGG D D + EE PF C CR
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKCY-VCR 251
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 23.4 bits (48), Expect = 4.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 146 RPRCPSTRKNWCNVP 190
RPR PS R N N+P
Sbjct: 126 RPRTPSMRVNCTNIP 140
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 6.3
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 139 LPSSTMS-VDKEELVQRAKLAEQAERYDDMAAA 234
LP T + D E+++ +QAE Y DM+ A
Sbjct: 649 LPLRTQNKTDAEKILSHVHALKQAEGYIDMSCA 681
>U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles
gambiae putativefatty acid binding protein mRNA, partial
cds. ).
Length = 141
Score = 22.6 bits (46), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 246 DGNRRRTXQRGEEPPFSC 299
DGN+ Q+GE+ P SC
Sbjct: 117 DGNKLIHEQKGEKRPRSC 134
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 22.6 bits (46), Expect = 8.3
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +2
Query: 320 PDGHHGVSFPQLNRKPRVXKENSKWQKNIGLKYKRSSXKSAT 445
P G S PQ+ +P K +W K + + + K+ T
Sbjct: 173 PGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKTRT 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,242
Number of Sequences: 2352
Number of extensions: 9463
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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