Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G05
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    24   1.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   3.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.3  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   5.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   7.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.7  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 54  ALNGYTGFDGCGAR 13
           +LNGY   DGC AR
Sbjct: 160 SLNGYGSSDGCDAR 173


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 321 GTYDIXISN*KEVPLLVXKFDAGFRHFLHRGRHV 220
           G +D+ + + + V  L     A F    HRG H+
Sbjct: 183 GAFDVTLESGERVTFLDTPGHAAFISMRHRGAHI 216


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 11  PLAPQPSKPVYPFSAREKLILC 76
           PL P  S P++   A   L++C
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVIC 226


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 11  PLAPQPSKPVYPFSAREKLILC 76
           PL P  S P++   A   L++C
Sbjct: 205 PLQPVVSDPIFDKKAMSDLVIC 226


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 44  PFSAREKLILCLNLLV 91
           P  + EK+ LC+N+L+
Sbjct: 260 PADSGEKIALCINILL 275


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 407 LYSFAICCFLXEPSVFC 357
           L S  I C +  PSV C
Sbjct: 6   LLSLLITCLICSPSVHC 22


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   FGFPSGPAAVKTSISVQRKRKTDIVLKF 84
           +G  +GP A+K+ +        D+ ++F
Sbjct: 614 WGGKAGPCAIKSVVPSDESHWNDLAMEF 641


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 1   FGFPSGPAAVKTSISVQRKRKTDIVLKF 84
           +G  +GP A+K+ +        D+ ++F
Sbjct: 652 WGGKAGPCAIKSVVPSDESHWNDLAMEF 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,664
Number of Sequences: 438
Number of extensions: 2787
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)