Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G03
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   3.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   3.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 201 LVIIFAESTHSPRFTLPAFM 260
           L ++F E T SP    PAF+
Sbjct: 20  LAVVFQEITSSPAGRSPAFL 39


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 201 LVIIFAESTHSPRFTLPAFM 260
           L ++F E T SP    PAF+
Sbjct: 20  LAVVFQEITSSPAGRSPAFL 39


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 201 LVIIFAESTHSPRFTLPAFM 260
           L ++F E T SP    PAF+
Sbjct: 20  LAVVFQEITSSPAGRSPAFL 39


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 383 LLGSQCNCVHVN*EHRHDSHKCQN 312
           L+G   NCV V  E  + SH CQN
Sbjct: 251 LIGLIKNCVIVIFELYYLSHVCQN 274


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 245 CESRAMCRFGKNYYKLVY*VGF 180
           CE++A C   KN Y+ +  VG+
Sbjct: 108 CENQATCVQNKNQYQCLCGVGW 129


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 104 VNTDQDNPPPPAXRTWPSYGQTPRT 178
           ++ + + PPPP      S+ +T RT
Sbjct: 724 LSMENNAPPPPPPPRVESFAETVRT 748


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 334 MTVTNVKTKSIAGSNRRYNSFGGAFMNA 251
           + VT  + + +     +YN F  AF++A
Sbjct: 179 IAVTAYQNEEVTALKIKYNPFAKAFLDA 206


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 240 FTLPAFMKAPPNELYRRLLPAMLFVLTFVTVMT 338
           + L   + + P E+    +PAM  VL  + VMT
Sbjct: 169 YLLTVAVNSIPGEVGGYDIPAMSNVLDIINVMT 201


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +2

Query: 494 RCCYHTYRTG 523
           RCCYH    G
Sbjct: 614 RCCYHAVAPG 623


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +2

Query: 494 RCCYHTYRTG 523
           RCCYH    G
Sbjct: 506 RCCYHAVAPG 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,611
Number of Sequences: 336
Number of extensions: 2921
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)