Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_G03
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    27   7.0  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U29244-9|AAN60507.1|  681|Caenorhabditis elegans Eps15 (endocyto...    27   9.2  
U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocyto...    27   9.2  
AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.      27   9.2  
AL132877-7|CAC70108.1|  686|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 305 ALCFDICDCHDDALNLHGHSCIGSPT 382
           A+C  +C C   ALN  G +CI S T
Sbjct: 53  AICHSVCQCVKGALNT-GTTCIASST 77


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 305 ALCFDICDCHDDALNLHGHSCIGSPT 382
           A+C  +C C   ALN  G +CI S T
Sbjct: 53  AICHSVCQCVKGALNT-GTTCIASST 77


>U29244-9|AAN60507.1|  681|Caenorhabditis elegans Eps15 (endocytosis
           protein) homologoussequence protein 1, isoform b
           protein.
          Length = 681

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 96  NLS*IQIKITHLHLLXEPGQAMDKPPEPKPNLIDKLVIIFAESTHSPRFTLPAFMKAP 269
           NL  I++ +  LHL+    Q+   P +  PNLI     ++A S  SP F  P     P
Sbjct: 168 NLDRIEMSVA-LHLVYRSLQSDPVPAQLPPNLIHPSKAMYAHS--SPNFAAPPHPPRP 222


>U29244-8|AAC71084.1|  751|Caenorhabditis elegans Eps15 (endocytosis
           protein) homologoussequence protein 1, isoform a
           protein.
          Length = 751

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 96  NLS*IQIKITHLHLLXEPGQAMDKPPEPKPNLIDKLVIIFAESTHSPRFTLPAFMKAP 269
           NL  I++ +  LHL+    Q+   P +  PNLI     ++A S  SP F  P     P
Sbjct: 168 NLDRIEMSVA-LHLVYRSLQSDPVPAQLPPNLIHPSKAMYAHS--SPNFAAPPHPPRP 222


>AY027560-1|AAK13051.1|  796|Caenorhabditis elegans EHS-1 protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 96  NLS*IQIKITHLHLLXEPGQAMDKPPEPKPNLIDKLVIIFAESTHSPRFTLPAFMKAP 269
           NL  I++ +  LHL+    Q+   P +  PNLI     ++A S  SP F  P     P
Sbjct: 213 NLDRIEMSVA-LHLVYRSLQSDPVPAQLPPNLIHPSKAMYAHS--SPNFAAPPHPPRP 267


>AL132877-7|CAC70108.1|  686|Caenorhabditis elegans Hypothetical
           protein Y105E8B.2a protein.
          Length = 686

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 414 LARIGQGSAALIAYVRQLHLTARSKPQDVVTT--PTEQVKVLDSIFG 548
           L ++G+G+ A   Y+R+     RS  +DV  +  P   VK L +++G
Sbjct: 382 LTQLGRGTYATDVYLRRRSAMQRSAMRDVTVSEEPISYVKQLCTLYG 428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,361,777
Number of Sequences: 27780
Number of extensions: 282117
Number of successful extensions: 641
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)