Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F23
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    52   5e-07
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   6.6  
U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant respons...    27   8.7  
U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant respons...    27   8.7  
U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant respons...    27   8.7  
AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant respo...    27   8.7  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 95  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 214
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +3

Query: 216 DIQIEGFNPSAEEA--DEGTDSAVESGVDIXLNHRLXETYAFGDKKSY 353
           +I + G NPSAEE   D+G+D  VE G+DI LNH+L E   + D   +
Sbjct: 41  EIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMF 88



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 479 RNFSFFTGESMDC---DGMVAMMEYXXFDGTQIPIMMFFKHGLQXEK 610
           +N +FF GE       +G VA++EY   DGT++P +M  K  +  EK
Sbjct: 134 KNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 234  FNPSAEEADEGTDSAVESG-VDIXLNH 311
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 234  FNPSAEEADEGTDSAVESG-VDIXLNH 311
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform a protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/35 (20%), Positives = 22/35 (62%)
 Frame = -1

Query: 145 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 41
           +++ HL+ +    ++LH++ +E ++  ++ K G +
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 332


>U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform c protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/35 (20%), Positives = 22/35 (62%)
 Frame = -1

Query: 145 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 41
           +++ HL+ +    ++LH++ +E ++  ++ K G +
Sbjct: 326 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 360


>U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform b protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/35 (20%), Positives = 22/35 (62%)
 Frame = -1

Query: 145 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 41
           +++ HL+ +    ++LH++ +E ++  ++ K G +
Sbjct: 328 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 362


>AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant response
           protein ODR-4 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/35 (20%), Positives = 22/35 (62%)
 Frame = -1

Query: 145 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 41
           +++ HL+ +    ++LH++ +E ++  ++ K G +
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,950,522
Number of Sequences: 27780
Number of extensions: 235508
Number of successful extensions: 555
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)