Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F20
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...   140   6e-34
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    29   3.8  
AL110479-14|CAB60319.1|  417|Caenorhabditis elegans Hypothetical...    28   6.6  
AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical ...    28   6.6  
U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical p...    27   8.7  
U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score =  140 bits (340), Expect = 6e-34
 Identities = 73/168 (43%), Positives = 100/168 (59%)
 Frame = +2

Query: 146 MPNDTNEERRRXVLLGPLPAGFLRADATSDGVDSDYEXXXXXXXXXYGAAVPQSGPPMTA 325
           M  +T  ERRR VL+G LP  FLR       V                + VP   P    
Sbjct: 1   MNTETVAERRRQVLVGELPPHFLRL-----AVPIQQTAEPEIVQPRMVSFVP---PNTRG 52

Query: 326 RLSVTIAQAKLVKNYGLTRMDPYVRVRVGHCIYETHTDPSGGKTPRWNKVIHCLLPPGVN 505
           RLSVTI +A LVKNYGL RMDPY RVRVG+  ++T+   + G+ P WN+ ++  LP  V 
Sbjct: 53  RLSVTILEANLVKNYGLVRMDPYCRVRVGNVEFDTNVAANAGRAPTWNRTLNAYLPMNVE 112

Query: 506 TIYLEIFDECSFTMDELIAWTHITIPQAVLNGETHEXWYPLNGKQGDG 649
           +IY++IFDE +F  DE+IAW HI +P A+ NG+  + ++ L+G+QG+G
Sbjct: 113 SIYIQIFDEKAFGPDEVIAWAHIMLPLAIFNGDNIDEYFQLSGQQGEG 160


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 244 VHTVRSSISTKKTCWKRT*QYXTTTFFICIIRHC 143
           V  V+SS S+ KTCW+ T +   T  ++C +  C
Sbjct: 360 VVNVQSSSSSAKTCWQNT-KSSLTNMYVCEVATC 392


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 289 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 414
           C  TTK   N++ +KCH      C K+   +  P C  ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 289 CCSTTKWPSNDSETKCHYSSS*AC*KLWTNSYGPVCSCACWT 414
           C  TTK   N++ +KCH      C K+   +  P C  ACW+
Sbjct: 514 CFGTTKCSDNEAWSKCH-----NCEKVCFQTANPSCK-ACWS 549


>AL110479-14|CAB60319.1|  417|Caenorhabditis elegans Hypothetical
           protein Y105C5B.15 protein.
          Length = 417

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 107 YINFTHQLTMTSTMPNDT 160
           Y+ +TH+ TMT  +P DT
Sbjct: 81  YVRYTHRATMTKMVPGDT 98


>AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical
           protein C29F9.8 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 467 NKVIHCLLPPGVNTIY 514
           N ++HCLL  GVNT+Y
Sbjct: 140 NAILHCLLCLGVNTLY 155


>U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical
           protein D2092.1a protein.
          Length = 804

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 386 DPYVRVRV-GHCIYETHTDPSGGKTPRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIA 562
           DPYV+ R   + +Y++ T       P W++    ++      I LE+FD   F  D+ + 
Sbjct: 79  DPYVKFRYKDNIVYKSGTIFKN-LNPSWDEEFQMIVDDVTCPIRLEVFDFDRFCTDDFMG 137

Query: 563 WTHITIPQ 586
              + + Q
Sbjct: 138 AAEVDMSQ 145


>U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical
           protein D2092.1b protein.
          Length = 890

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 386 DPYVRVRV-GHCIYETHTDPSGGKTPRWNKVIHCLLPPGVNTIYLEIFDECSFTMDELIA 562
           DPYV+ R   + +Y++ T       P W++    ++      I LE+FD   F  D+ + 
Sbjct: 165 DPYVKFRYKDNIVYKSGTIFKN-LNPSWDEEFQMIVDDVTCPIRLEVFDFDRFCTDDFMG 223

Query: 563 WTHITIPQ 586
              + + Q
Sbjct: 224 AAEVDMSQ 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,994,934
Number of Sequences: 27780
Number of extensions: 283057
Number of successful extensions: 678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)