Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F17
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1616 + 28260204-28262555                                         30   1.5  
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055     30   1.5  
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104...    29   2.7  
07_03_0004 - 12260322-12261432,12261691-12261821,12262386-122624...    28   4.7  

>08_02_1616 + 28260204-28262555
          Length = 783

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 136 ARSLRAARMSRTHTQPGPSAHTXWH 62
           AR L+  R+S +H  PGPS+ T  H
Sbjct: 757 ARMLQLQRLSHSHVAPGPSSSTTTH 781


>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
          Length = 963

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 133  RSLRAARMSRTHTQPGPSAHTXWHARTDSSALHV 32
            RSLRA+  SR+ +QP  S+     + T SS+ HV
Sbjct: 930  RSLRASLASRSKSQPASSSQQDKDSSTPSSSAHV 963


>03_05_0730 +
           27208293-27208813,27209052-27209173,27210429-27210477,
           27210689-27210938,27211474-27211619,27211699-27211846,
           27212544-27212612,27212641-27212784
          Length = 482

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 579 EPRFGLGVXVVVIRLQDQRERTRP 508
           E +FG G+  ++ RLQ +RER RP
Sbjct: 175 ETKFGTGLDGMLTRLQRERERVRP 198


>07_03_0004 -
           12260322-12261432,12261691-12261821,12262386-12262491,
           12262777-12262875,12262960-12263312,12263593-12263619
          Length = 608

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 434 EAARPKEQLPPGAAADWYSLRQSVNLVRQGCEQ 336
           +A RPK QL PG   +W   R  +     GC+Q
Sbjct: 143 DAKRPKRQLLPG---EWECPRSKLGFTAHGCQQ 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,923,208
Number of Sequences: 37544
Number of extensions: 147702
Number of successful extensions: 702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)