BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_F17
(582 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 93 2e-19
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 93 2e-19
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 93 2e-19
X06289-1|CAA29617.1| 880|Drosophila melanogaster delta D1 protein. 58 1e-08
Y00222-1|CAA68369.1| 832|Drosophila melanogaster delta protein ... 56 3e-08
BT003267-1|AAO25024.1| 833|Drosophila melanogaster LD21369p pro... 56 3e-08
AY437235-1|AAR21468.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437229-1|AAR21467.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437223-1|AAR21466.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437217-1|AAR21465.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437211-1|AAR21464.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437205-1|AAR21463.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437199-1|AAR21462.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437193-1|AAR21461.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437187-1|AAR21460.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437181-1|AAR21459.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437175-1|AAR21458.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437169-1|AAR21457.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437163-1|AAR21456.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437157-1|AAR21455.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437151-1|AAR21454.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AY437145-1|AAR21453.1| 833|Drosophila melanogaster delta protei... 56 3e-08
AE014297-2650|AAN13798.1| 833|Drosophila melanogaster CG3619-PB... 56 3e-08
AE014297-2649|AAF55657.1| 833|Drosophila melanogaster CG3619-PA... 56 3e-08
AE014296-3229|AAN11635.1| 453|Drosophila melanogaster CG32221-P... 29 3.5
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 232 GVFELQILEFTNYRLEVXXXXXXXXXXXXXXXXXXXSHPCRTRFTLCLKEYQSA---AAP 402
G FEL+ILE +N + PC T F LCLKEYQ+ A+
Sbjct: 85 GNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCSPCTTAFRLCLKEYQTTEQGASI 144
Query: 403 GGSCSFGRAASPVLGTDSFTLAEP-LYTLALPFSFRWTRSFTLILQAYDDYXYSEPEA 573
CSFG A + +LG SF L++P + + LPF+FRWT+SFTLILQA D Y S P+A
Sbjct: 145 STGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQALDMYNTSYPDA 202
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 232 GVFELQILEFTNYRLEVXXXXXXXXXXXXXXXXXXXSHPCRTRFTLCLKEYQSA---AAP 402
G FEL+ILE +N + PC T F LCLKEYQ+ A+
Sbjct: 81 GNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCSPCTTAFRLCLKEYQTTEQGASI 140
Query: 403 GGSCSFGRAASPVLGTDSFTLAEP-LYTLALPFSFRWTRSFTLILQAYDDYXYSEPEA 573
CSFG A + +LG SF L++P + + LPF+FRWT+SFTLILQA D Y S P+A
Sbjct: 141 STGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQALDMYNTSYPDA 198
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 232 GVFELQILEFTNYRLEVXXXXXXXXXXXXXXXXXXXSHPCRTRFTLCLKEYQSA---AAP 402
G FEL+ILE +N + PC T F LCLKEYQ+ A+
Sbjct: 84 GNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCSPCTTAFRLCLKEYQTTEQGASI 143
Query: 403 GGSCSFGRAASPVLGTDSFTLAEP-LYTLALPFSFRWTRSFTLILQAYDDYXYSEPEA 573
CSFG A + +LG SF L++P + + LPF+FRWT+SFTLILQA D Y S P+A
Sbjct: 144 STGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQALDMYNTSYPDA 201
>X06289-1|CAA29617.1| 880|Drosophila melanogaster delta D1 protein.
Length = 880
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF LCLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRLCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>Y00222-1|CAA68369.1| 832|Drosophila melanogaster delta protein
protein.
Length = 832
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>BT003267-1|AAO25024.1| 833|Drosophila melanogaster LD21369p
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437235-1|AAR21468.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437229-1|AAR21467.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437223-1|AAR21466.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437217-1|AAR21465.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437211-1|AAR21464.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437205-1|AAR21463.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437199-1|AAR21462.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437193-1|AAR21461.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437187-1|AAR21460.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437181-1|AAR21459.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437175-1|AAR21458.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437169-1|AAR21457.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437163-1|AAR21456.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437157-1|AAR21455.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437151-1|AAR21454.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AY437145-1|AAR21453.1| 833|Drosophila melanogaster delta protein
protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AE014297-2650|AAN13798.1| 833|Drosophila melanogaster CG3619-PB,
isoform B protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AE014297-2649|AAF55657.1| 833|Drosophila melanogaster CG3619-PA,
isoform A protein.
Length = 833
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Frame = +1
Query: 349 CRTRFTLCLKEYQSAAAPGGSCSFGRAASPVLGTDSFTLAEPL------YT--LALPFSF 504
C+TRF +CLK YQ+ C++G +P+LG +S L + +T + PFSF
Sbjct: 61 CKTRFRVCLKHYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSF 120
Query: 505 RWTRSFTLILQAYDD 549
W +F+LI++A+ D
Sbjct: 121 SWPGTFSLIVEAWHD 135
>AE014296-3229|AAN11635.1| 453|Drosophila melanogaster CG32221-PA
protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 457 FTLAEPLYTLALPFSFRWTRSFTLILQ--AYDDYXYSE 564
FTL++ Y +A PF+ + R F+ +L+ YDD SE
Sbjct: 170 FTLSQQYYLIASPFTVQEVRQFSEMLELGLYDDVTASE 207
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,162,479
Number of Sequences: 53049
Number of extensions: 226950
Number of successful extensions: 1009
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -