Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_F15
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   0.58 
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    25   1.8  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    25   1.8  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 300 EHQKRGEMTPHLFSLPVRFTTILPA--L*SSTISNSPM*PCFIITVKNLTMTLEXGPDED 127
           E+ + G+M  HLF +   F++++ A     S++  + +      +  +LT TLE   D+D
Sbjct: 107 EYDESGDMEAHLFRMDELFSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDD 166

Query: 126 LS 121
           L+
Sbjct: 167 LT 168


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 264 TSVVSFHL-VFDVPINDIERWTN 329
           T  + F L V D+P +D E+WT+
Sbjct: 154 TETMHFCLDVLDIPFSDFEQWTS 176


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 264 TSVVSFHL-VFDVPINDIERWTN 329
           T  + F L V D+P +D E+WT+
Sbjct: 154 TETMHFCLDVLDIPFSDFEQWTS 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,869
Number of Sequences: 2352
Number of extensions: 6936
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)